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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS10260 [old locus tag: SA1785 ]
- pan locus tag?: SAUPAN005094000
- symbol: SA_RS10260
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241ATGAATAATCGTGAACAAATTGAACAATCCGTTATAAGTGCTAGTGCGTATAACGGCAAT
GACACAGAGGGATTGCTAAAAGAGATTGAGGACGTGTATAAGAAAGCGCGAGCATTTGAT
GAAATACTTGATGGAATGACAAATGCTATTCAACATTCAGTTAAAGAAGGTATTGAACTT
GATGAAGCAGTAGGAATTATGGCAGGTCAAGTTATCTATAAATATGAGGAGGAACAAGGA
AAATGA60
120
180
240
246
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS10260 [old locus tag: SA1785 ]
- symbol: SA_RS10260
- description: hypothetical protein
- length: 81
- theoretical pI: 4.11695
- theoretical MW: 9066.99
- GRAVY: -0.609877
⊟Function[edit | edit source]
- TIGRFAM: hercynine metabolism small protein (TIGR04374; HMM-score: 14)
- TheSEED: see SA1785
- PFAM: no clan defined DUF1024; Protein of unknown function (DUF1024) (PF06260; HMM-score: 176.8)and 1 moreWbqC; WbqC-like protein family (PF08889; HMM-score: 12.5)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.01086
- TAT(Tat/SPI): 0.001409
- LIPO(Sec/SPII): 0.001151
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNNREQIEQSVISASAYNGNDTEGLLKEIEDVYKKARAFDEILDGMTNAIQHSVKEGIELDEAVGIMAGQVIYKYEEEQGK
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.