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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS11465 [old locus tag: SA1991 ]
  • pan locus tag?: SAUPAN005585000
  • symbol: SA_RS11465
  • pan gene symbol?: lacG
  • synonym:
  • product: 6-phospho-beta-galactosidase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS11465 [old locus tag: SA1991 ]
  • symbol: SA_RS11465
  • product: 6-phospho-beta-galactosidase
  • replicon: chromosome
  • strand: -
  • coordinates: 2262657..2264069
  • length: 1413
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002745 (2262657..2264069) NCBI
  • BioCyc: SA_RS11465 BioCyc
  • MicrobesOnline: see SA1991

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGACTAAAACATTACCTGAAGATTTTATTTTTGGTGGAGCAACAGCAGCATATCAAGCA
    GAAGGTGCGACAAATACAGATGGTAAAGGTCGTGTTGCATGGGATACGTATTTGGAAGAA
    AACTATTGGTACACTGCAGAACCAGCGAGTGATTTTTATAACAGATATCCAGTGGATTTA
    GAATTAAGTGAAAAATTCGGTGTTAATGGTATCCGTATTTCAATTGCATGGTCACGTATC
    TTCCCAAATGGATATGGCGAAGTTAACCCTAAAGGTGTTGAGTATTACCATAAGTTATTT
    GCAGAGTGTCATAAACGTCATGTTGAACCATTTGTAACATTGCATCATTTTGATACACCA
    GAAGTGTTACACAAAGATGGCGATTTTCTAAATCGTAAAACGATTGACTACTTTGTAGAT
    TATGCTGAATATTGTTTTAAAGAATTCCCAGAAGTAAAATATTGGACTACATTCAATGAA
    ATTGGACCTATTGGTGATGGTCAATATTTAGTAGGTAAATTCCCTCCAGGTATTAAATAT
    GATTTTGAAAAAGTTTTCCAATCACATCACAATATGATGGTTGCTCATGCAAGAGCAGTA
    AAATTATTTAAAGATGGCGGCTATCAAGGAGAAATTGGTGTTGTACACGCATTGCCAACA
    AAATATCCGTTCGATCCATCAAATCCTGAAGATGTTCGTGCAGCAGAATTAGAAGATATC
    ATCCATAATAAATTCATCTTAGATGCAACATATTTAGGTAAGTATTCTCGTGAAACGATG
    GAAGGTGTGCAACATATCTTATCTGTTAATGGCGGTAAATTAAATATTACAGATGAAGAT
    TATGCCATTTTAGATGCAGCCAAAGATTTAAACGACTTCTTAGGTATCAATTACTACATG
    AGTGACTGGATGAGAGGTTACGATGGAGAATCTGAAATCACGCATAATGCGACAGGTGAT
    AAAGGCGGTTCTAAATACCAACTTAAAGGTGTCGGACAACGTGAATTTGATGTCGACGTA
    CCTCGCACAGACTGGGACTGGATGATCTATCCTCAAGGTTTATATGATCAAATCATGCGT
    GTTGTTAAAGATTATCCTAACTATCACAAGATTTATATCACTGAAAATGGTTTAGGATAT
    AAAGATGAATTTATTGAATCTGAAAAAACAGTTCATGATGATGCACGTATTGATTATGTA
    AGACAACATTTGAACGTTATTGCAGATGCTATTAAAGATGGTGCAAATGTTAAAGGTTAC
    TTTATTTGGTCATTAATGGATGTGTTCTCTTGGTCAAATGGTTATGAAAAACGATATGGT
    TTATTCTATGTCGATTTTGAGACTCAAGAACGTTATCCTAAGAAAAGTGCTTATTGGTAC
    AAAGAGTTAGCCGAAACAAAAGAAATTAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1413

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA_RS11465 [old locus tag: SA1991 ]
  • symbol: SA_RS11465
  • description: 6-phospho-beta-galactosidase
  • length: 470
  • theoretical pI: 4.91432
  • theoretical MW: 54564.6
  • GRAVY: -0.594468

⊟Function[edit | edit source]

  • reaction:
    EC 3.2.1.85?  ExPASy
    6-phospho-beta-galactosidase A 6-phospho-beta-D-galactoside + H2O = 6-phospho-D-galactose + an alcohol
  • TIGRFAM:
    Metabolism Energy metabolism Biosynthesis and degradation of polysaccharides 6-phospho-beta-galactosidase (TIGR01233; EC 3.2.1.85; HMM-score: 865.6)
    and 1 more
    beta-galactosidase (TIGR03356; HMM-score: 391.7)
  • TheSEED: see SA1991
  • PFAM:
    Glyco_hydro_tim (CL0058) Glyco_hydro_1; Glycosyl hydrolase family 1 (PF00232; HMM-score: 585.9)
    and 1 more
    C2 (CL0154) IcmF_C; Type VI secretion protein IcmF C-terminal (PF06744; HMM-score: 12.6)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.093604
    • TAT(Tat/SPI): 0.025265
    • LIPO(Sec/SPII): 0.018078
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEYCFKEFPEVKYWTTFNEIGPIGDGQYLVGKFPPGIKYDFEKVFQSHHNMMVAHARAVKLFKDGGYQGEIGVVHALPTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIKDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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