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NCBI: 26-AUG-2013

Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA0739 [new locus tag: SA_RS04205 ]
  • pan locus tag?: SAUPAN002772000
  • symbol: SA0739
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SA0739 [new locus tag: SA_RS04205 ]
  • symbol: SA0739
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 845705..846433
  • length: 729
  • essential: no DEG other strains

Accession numbers[edit | edit source]

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGAAAAAAGTAATGGGGATATTATTAGCAAGTACACTTATCTTAGGTGCTTGTGGACAT
    CATCAAGATAGTGCAAAAAAAGAGAGCGCTAGTCACAAAAAGAAAGAAAATGACAATGAA
    GAATTAAATGAAGAACTTAAAGAATTTAAAAGCAAAAAAAATATGGATATAAAAATTAAA
    GGCGATACTATTGTTAGTGACAAATTTGAAGCTAAAATAAAAGAACCGTTTATCATCAAT
    GAAAAAGATGAGAAAAAGAAATATATCGCTTTTAAAATGGAAATTACTGCTAAAAAAGAC
    GATAAAGATTTAAATCCATCTTCTATTTCTCATGACTATATTAATATCACTCAAGATGAT
    AAAAATACAGTAAATAAATTAAGAGATGGTTATCTTTTAAGTGATAAAAAATATAAAGAT
    TGGACAGAACATAACCAAGATCAAATTAAAAAAGGCAAAACTGCACAAGCCATGTTTATC
    TATGAGTTAAGAGGTGATGGAAATATTAATTTAAATGTCCATAAATACTCAGAAGATAAA
    ACAGTTGATTCTAAATCATTCAAATTTAGTAAACTTAAAACCGAAGATTTTTCTCATAGA
    GCGGAAACAAGAGAAGAAGTAGAAAAGAAAGAAAAAGAATTTGAAGAAGAGTACAAAAAA
    GAACAAGAACGAGAGAAAGAAAAAGAAAAGCAAAAAGATGACGACCACAGTAGTTTAGAT
    GAAGTATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    729

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SA0739 [new locus tag: SA_RS04205 ]
  • symbol: SA0739
  • description: hypothetical protein
  • length: 242
  • theoretical pI: 6.73788
  • theoretical MW: 28418.7
  • GRAVY: -1.32686

Function[edit | edit source]

  • TIGRFAM:
  • TheSEED  :
    • Hypothetical SAV0808 homolog, near pathogenicity islands SaPI att-site
    Phages, Prophages, Transposable elements, Plasmids Pathogenicity islands Staphylococcal pathogenicity islands SaPI  Hypothetical SAV0808 homolog, near pathogenicity islands SaPI att-site
  • PFAM:
    MPT63-MPB63 (CL0524) DUF5067; Domain of unknown function (DUF5067) (PF16729; HMM-score: 72.7)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 4.6
    • Cellwall Score: 2.48
    • Extracellular Score: 2.92
    • Internal Helices: 0
  • LocateP: Lipid anchored
    • Prediction by SwissProt Classification: Extracellular
    • Pathway Prediction: Sec-(SPII)
    • Intracellular possibility: -0.33
    • Signal peptide possibility: 1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: ILGACGH
  • SignalP: Signal peptide LIPO(Sec/SPII) length 17 aa
    • SP(Sec/SPI): 0.001081
    • TAT(Tat/SPI): 0.00008
    • LIPO(Sec/SPII): 0.998546
    • Cleavage Site: CS pos: 17-18. LGA-CG. Pr: 0.9991
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MKKVMGILLASTLILGACGHHQDSAKKESASHKKKENDNEELNEELKEFKSKKNMDIKIKGDTIVSDKFEAKIKEPFIINEKDEKKKYIAFKMEITAKKDDKDLNPSSISHDYINITQDDKNTVNKLRDGYLLSDKKYKDWTEHNQDQIKKGKTAQAMFIYELRGDGNINLNVHKYSEDKTVDSKSFKFSKLKTEDFSHRAETREEVEKKEKEFEEEYKKEQEREKEKEKQKDDDHSSLDEV

Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]