Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002571000
- symbol?: —
- synonym:
- description?: GTP-binding protein
- GTP-binding protein
- cobalamin synthesis protein/P47K family protein
- cobalamin synthesis protein, P47K family protein
- G3E family GTPase, putative
- cobalamin (vitamin B12) biosynthesis protein
- cobalamin synthesis-like protein
- cobalamin synthesis protein, P47K
- cobalamin synthesis protein P47K
- cobalamin synthesis-related protein
- cobW/HypB/UreG, nucleotide-binding domain protein
- Low-affinity zinc transport protein
- putative cobalamin synthesis protein
- putative G3E family GTPase
- Putative GTPases (G3E family)
- putative metal chaperone, GTPase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3082956..3083897
- synteny block?: BlockID0018070
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0664
08BA02176:
C248_0772
11819-97:
MS7_0739
6850:
RSAU_000663
71193:
ST398NM01_0765
ECT-R 2:
ECTR2_639
ED133:
SAOV_0722
ED98:
SAAV_0650
HO 5096 0412:
SAEMRSA15_06130
JH1:
SaurJH1_0727
JH9:
SaurJH9_0711
JKD6008:
SAA6008_00704
JKD6159:
SAA6159_00642
LGA251:
SARLGA251_06200
M013:
M013TW_0674
MRSA252:
SAR0740
MSHR1132:
SAMSHR1132_06330
MSSA476:
SAS0652
Mu3:
SAHV_0684
Mu50:
SAV0687
MW2:
MW0649
RF122:
SAB0636
ST398:
SAPIG0765
T0131:
SAT0131_00758
TCH60:
HMPREF0772_12500
TW20:
SATW20_07620
USA300_TCH1516:
USA300HOU_0710 (cobW2)
VC40:
SAVC_03070
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKNNKDEKIRISIINGFLGSGKTTLLTHYISELLKNDEKIKIIMNEFGTFDIDSNSISNE
N315 MKNNKDEKIRISIINGFLGSGKTTLLTHYISELLKNDEKIKIIMNEFGTFDIDSNSISNE
NCTC8325 MKNNKDEKIRISIINGFLGSGKTTLLTHYISELLKNDEKIKIIMNEFGTFDIDSNSISNE
Newman MKNNKDEKIRISIINGFLGSGKTTLLTHYISELLKNDEKIKIIMNEFGTFDIDSNSISNE
USA300_FPR3757 MKNNKDEKIRISIINGFLGSGKTTLLTHYISELLKNDEKIKIIMNEFGTFDIDSNSISNE
************************************************************
COL IEVHSLINGCVCCDLKQELVYELKAIALKGDVNHVIIEATGIAHPLELLVACQDPQIVNF
N315 IEVHSLINGCVCCDLKQELVYELKAIALKGDVNHVIIEATGIAHPLELLVACQDPQIVNF
NCTC8325 IEVHSLINGCVCCDLKQELVYELKAIALKGDVNHVIIEATGIAHPLELLVACQDPQIVNF
Newman IEVHSLINGCVCCDLKQELVYELKAIALKGDVNHVIIEATGIAHPLELLVACQDPQIVNF
USA300_FPR3757 IEVHSLINGCVCCDLKQELVYELKAIALKGDVNHVIIEATGIAHPLELLVACQDPQIVNF
************************************************************
COL FEKPIIYGVLDATRFLERHQYTENTVSLMEDQLKLSDMIIINKIDLITDDSLEKIDKQLG
N315 FEKPIIYGVLDATRFLERHQYTENTVSLMEEQLKLSDMIIINKIDLITDDSLEKIDKQLG
NCTC8325 FEKPIIYGVLDATRFLERHQYTENTVSLMEDQLKLSDMIIINKIDLITDDSLEKIDKQLG
Newman FEKPIIYGVLDATRFLERHQYTENTVSLMEDQLKLSDMIIINKIDLITDDSLEKIDKQLG
USA300_FPR3757 FEKPIIYGVLDATRFLERHQYTENTVSLMEDQLKLSDMIIINKIDLITDDSLEKIDKQLG
******************************:*****************************
COL MICASIPTYKTTYGKVSLEELDLTVKDREISSHHHHHHGIKSMTYTFTGPIDRHLFYQFI
N315 MICASIPTYKTTYGKVSLEELDLTVKDREISSHHHHHHGIKSMTYTFTGPIDRQLFYQFI
NCTC8325 MICASIPTYKTTYGKVSLEELDLTVKDREISSHHHHHHGIKSMTYTFTGPIDRHLFYQFI
Newman MICASIPTYKTTYGKVSLEELDLTVKDREISSHHHHHHGIKSMTYTFTGPIDRHLFYQFI
USA300_FPR3757 MICASIPTYKTTYGKVSLEELDLTVKDREISSHHHHHHGIKSMTYTFTGPIDRHLFYQFI
*****************************************************:******
COL MKLPESVLRLKGYVSFRDQPNAIYEFQYAYGLPDYGIIGMQLPLTIVIIGETLDTNHIRN
N315 MKLPESVLRLKGYVSFRNQPNAIYEFQYAYGLPDYGIIGMQLPLTIVIIGETLDTNHIRN
NCTC8325 MKLPESVLRLKGYVSFRDQPNAIYEFQYAYGLPDYGIIGMQLPLTIVIIGETLDTNHIRN
Newman MKLPESVLRLKGYVSFRDQPNAIYEFQYAYGLPDYGIIGMQLPLTIVIIGETLDTNHIRN
USA300_FPR3757 MKLPESVLRLKGYVSFRDQPNAIYEFQYAYGLPDYGIIGMQLPLTIVIIGETLDTNHIRN
*****************:******************************************
COL QLDMLQFT
N315 QLDMLQFT
NCTC8325 QLDMLQFT
Newman QLDMLQFT
USA300_FPR3757 QLDMLQFT
********