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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003168000
- symbol?: trfA
- synonym:
- description?: adaptor protein MecA
- adaptor protein MecA
- adaptor protein
- negative regulator of genetic competence, putative
- adapter protein mecA
- Negative regulator of genetic competence MecA
- genetic competence repressor
- negative regulator of genetic competence (MecA) family protein
- negative regulator of genetic competence family protein
- putative negative regulator of genetic competence
- regulatory protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3561029..3561748
- synteny block?: BlockID0022550
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0953
08BA02176:
C248_1021
11819-97:
MS7_0954
6850:
RSAU_000874
71193:
ST398NM01_0994
ECT-R 2:
ECTR2_853
ED133:
SAOV_0944
ED98:
SAAV_0961
HO 5096 0412:
SAEMRSA15_08290
JH1:
SaurJH1_1016
JH9:
SaurJH9_0997
JKD6008:
SAA6008_00951 (mecA2)
JKD6159:
SAA6159_00855 (mecA2)
LGA251:
SARLGA251_09140
M013:
M013TW_0921
MRSA252:
SAR0966
MSHR1132:
SAMSHR1132_08460
MSSA476:
SAS0868
Mu3:
SAHV_0993
Mu50:
SAV0998
MW2:
MW0880
RF122:
SAB0865
ST398:
SAPIG0994
T0131:
SAT0131_01033
TCH60:
HMPREF0772_12238 (mecA2)
TW20:
SATW20_09960
USA300_TCH1516:
USA300HOU_0956 (mecA2)
VC40:
SAVC_04160
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPL
N315 MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPL
NCTC8325 MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPL
Newman MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPL
USA300_FPR3757 MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPL
************************************************************
COL WIQVHAFDKGVEVTISKSKNEDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFEQR
N315 WIQVHAFEKGVEVTISKSKNEDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFEQR
NCTC8325 WIQVHAFEKGVEVTISKSKNEDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFEQR
Newman WIQVHAFEKGVEVTISKSKNEDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFEQR
USA300_FPR3757 WIQVHAFEKGVEVTISKSKNEDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFEQR
*******:****************************************************
COL TKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHSNPITTEFEDLLYMVDGTYYY
N315 TKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHSNPITTEFEDLLYMVDGTYYY
NCTC8325 TKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHSNPITTEFEDLLYMVDGTYYY
Newman TKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHSNPITTEFEDLLYMVDGTYYY
USA300_FPR3757 TKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHSNPITTEFEDLLYMVDGTYYY
************************************************************
COL AVYFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE
N315 AVHFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE
NCTC8325 AVYFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE
Newman AVYFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE
USA300_FPR3757 AVYFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE
**:********************************************************