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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003254000
- symbol?: patA
- synonym:
- description?: N-acetyl-L,L-diaminopimelate aminotransferase
- N-acetyl-L,L-diaminopimelate aminotransferase
- aminotransferase, class I
- aminotransferase A, putative
- aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
- Aromatic amino acid aminotransferase
- aromatic amino acid transferase
- aspartate transaminase
- class I and II aminotransferase
- HisC-like protein
- putative aminotransferase A
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3629313..3630467
- synteny block?: BlockID0023380
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1004
08BA02176:
C248_1075
11819-97:
MS7_1007 (patA)
6850:
RSAU_000937
71193:
ST398NM01_1047
ECT-R 2:
ECTR2_905
ED133:
SAOV_0996c
ED98:
SAAV_1014
HO 5096 0412:
SAEMRSA15_08810
JH1:
SaurJH1_1131
JH9:
SaurJH9_1108
JKD6008:
SAA6008_01004
JKD6159:
SAA6159_00906
LGA251:
SARLGA251_09640
M013:
M013TW_0979
MRSA252:
SAR1023
MSHR1132:
SAMSHR1132_08980
MSSA476:
SAS0985
Mu3:
SAHV_1042
Mu50:
SAV1049
MW2:
MW0933
RF122:
SAB0917c
ST398:
SAPIG1047
T0131:
SAT0131_01084
TCH60:
HMPREF0772_12184 (aspC)
TW20:
SATW20_10460
USA300_TCH1516:
—
VC40:
SAVC_04415
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKLSLNSNSKYLRAPSIRQFSNRMNNLDDCVNLTIGQPDFPMPDVVKKAYIDAINNDKTS
N315 MKLSLNSNSKYLRAPSIRQFSNRMNNLDDCVNLTIGQPDFPMPDVVKKAYIDAINNDKTS
NCTC8325 MKLSLNSNSKYLRAPSIRQFSNRMNNLDDCVNLTIGQPDFPMPDVVKKAYIDAINNDKTS
Newman MKLSLNSNSKYLRAPSIRQFSNRMNNLDDCVNLTIGQPDFPMPDVVKKAYIDAINNDKTS
USA300_FPR3757 MKLSLNSNSKYLRAPSIRQFSNRMNNLDDCVNLTIGQPDFPMPDVVKKAYIDAINNDKTS
************************************************************
COL YSHNKGLLETREAISQYFKNRYHFSYDPEEIIVTNGASEAIDTTLRSIIEPGDEIIIPGP
N315 YSHNKGLLETREAISQYFKNRYHFSYDPEEIIVTNGASEAIDTTLRSIIEPGDEIIIPGP
NCTC8325 YSHNKGLLETREAISQYFKNRYHFSYDPEEIIVTNGASEAIDTTLRSIIEPGDEIIIPGP
Newman YSHNKGLLETREAISQYFKNRYHFSYDPEEIIVTNGASEAIDTTLRSIIEPGDEIIIPGP
USA300_FPR3757 YSHNKGLLETREAISQYFKNRYHFSYDPEEIIVTNGASEAIDTTLRSIIEPGDEIIIPGP
************************************************************
COL IYAGYIPLIEVLGGKPIYIDTTATQFKITPDALESHISPKTKAVLLNYPTNPTGVVLKRN
N315 IYAGYIPLIEVLGGKPIYIDTTATQFKITPDALESHISPKTKAVLLNYPTNPTGVVLKRN
NCTC8325 IYAGYIPLIEVLGGKPIYIDTTATQFKITPDALESHISPKTKAVLLNYPTNPTGVVLKRN
Newman IYAGYIPLIEVLGGKPIYIDTTATQFKITPDALESHISPKTKAVLLNYPTNPTGVVLKRN
USA300_FPR3757 IYAGYIPLIEVLGGKPIYIDTTATQFKITPDALESHISPKTKAVLLNYPTNPTGVVLKRN
************************************************************
COL EVLNIVNVLKKYPLFIISDEIYAENTFSGKHVSFAEFEDIRDQLILIGGLSKSHSATGIR
N315 EVLNIVNVLKKYPIFIISDEIYAENTFSGKHVSFAEFEDIRDQLILIGGLSKSHSATGIR
NCTC8325 EVLNIVNVLKKYPLFIISDEIYAENTFSGKHVSFAEFEDIRDQLILIGGLSKSHSATGIR
Newman EVLNIVNVLKKYPLFIISDEIYAENTFSGKHVSFAEFEDIRDQLILIGGLSKSHSATGIR
USA300_FPR3757 EVLNIVNVLKKYPLFIISDEIYAENTFSGKHVSFAEFEDIRDQLILIGGLSKSHSATGIR
*************:**********************************************
COL IGFLLGPQYLIDKLTFMHAYNCICANVPAQIACITALNEGLEAPKYMNEAYVERRNYLVS
N315 IGFLLGPQYLIDKLTFMHAYNCICANVPAQIACITALNEGLEAPKYMNEAYVERRNYLVS
NCTC8325 IGFLLGPQYLIDKLTFMHAYNCIFANVPAQIACITALNEGLEAPKYMNEAYVERRNYLVS
Newman IGFLLGPQYLIDKLTFMHAYNCICANVPAQIACITALNEGLEAPKYMNEAYVERRNYLVS
USA300_FPR3757 IGFLLGPQYLIDKLTFMHAYNCICANVPAQIACITALNEGLEAPKYMNEAYVERRNYLVS
*********************** ************************************
COL ELTKLGFEITAQPEGAFYIFPSIKHITDDDFEFCVDLLESTHLAIVPGSSFTEFGKGFVR
N315 ELTKLGFEITAQPEGAFYIFPSIKHITDDDFEFCVDLLESTHLAIVPGSSFTEFGKGFVR
NCTC8325 ELTKLGFEITAQPEGAFYIFPSIKHITDDDFEFCVDLLESTHLAIVPGSSFTEFGKGFVR
Newman ELTKLGFEITAQPEGAFYIFPSIKHITDDDFEFCVDLLESTHLAIVPGSSFTEFGKGFVR
USA300_FPR3757 ELTKLGFEITAQPEGAFYIFPSIKHITDDDFEFCVDLLESTHLAIVPGSSFTEFGKGFVR
************************************************************
COL ISYAYEMDVLKEGMKRLAKYLNTK
N315 ISYAYEMDVLKEGMKRLAKYLNTK
NCTC8325 ISYAYEMDVLKEGMKRLAKYLNTK
Newman ISYAYEMDVLKEGMKRLAKYLNTK
USA300_FPR3757 ISYAYEMDVLKEGMKRLAKYLNTK
************************