PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004148000
• symbol^?: era
• synonym:
• description^?: GTP-binding protein Era

  descriptions from strain specific annotations:

  • GTP-binding protein Era
  • GTPase Era
  • GTP-binding protein era -like protein
  • pseudogene
  • putative GTP-binding protein
• strand^?: -
• coordinates^?: 4417523..4418422
• synteny block^?: BlockID0031780
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1624 (era)
N315:
SA1396 (era)
NCTC8325:
SAOUHSC_01668 (era)
Newman:
NWMN_1470 (era)
USA300_FPR3757:
SAUSA300_1527 (era)
04-02981:
SA2981_1525 (bex)
08BA02176:
C248_1610 (era)
11819-97:
MS7_1584 (era)
6850:
RSAU_001432 (era)
71193:
ST398NM01_1632
ECT-R 2:
ECTR2_1417 (era)
ED133:
SAOV_1567 (era)
ED98:
SAAV_1559 (era)
HO 5096 0412:
SAEMRSA15_14870 (era)
JH1:
SaurJH1_1659 (era)
JH9:
SaurJH9_1625 (era)
JKD6008:
SAA6008_01537 (era)
JKD6159:
SAA6159_01502 (era)
LGA251:
SARLGA251_14730 (era)
M013:
M013TW_1582
MRSA252:
SAR1644 (era)
MSHR1132:
SAMSHR1132_14070
MSSA476:
SAS1505 (era)
Mu3:
SAHV_1554 (era)
Mu50:
SAV1567 (era)
MW2:
MW1519 (era)
RF122:
SAB1439c (era)
ST398:
SAPIG1632 (era)
T0131:
SAT0131_01662
TCH60:
HMPREF0772_11573 (era)
TW20:
SATW20_15630 (era)
USA300_TCH1516:
USA300HOU_1568 (era)
VC40:
SAVC_07085 (era)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MTEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFID
  N315            MTEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFID
  NCTC8325        MTEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFID
  Newman          MTEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFID
  USA300_FPR3757  MTEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFID
                  ************************************************************
  
  COL             TPGIHKPKHKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVKTPVFLV
  N315            TPGIHKPKHKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVKTPVFLV
  NCTC8325        TPGIHKPKHKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVKTPVFLV
  Newman          TPGIHKPKHKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVKTPVFLV
  USA300_FPR3757  TPGIHKPKHKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVKTPVFLV
                  ************************************************************
  
  COL             LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD
  N315            LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD
  NCTC8325        LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD
  Newman          LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD
  USA300_FPR3757  LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD
                  ************************************************************
  
  COL             QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK
  N315            QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK
  NCTC8325        QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERGSQK
  Newman          QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK
  USA300_FPR3757  QISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRMVKESEDRVHIEATIYVERDSQK
                  ********************************************************.***
  
  COL             GIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGYVEDQD
  N315            GIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGYVEDQD
  NCTC8325        GIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGYVEDQD
  Newman          GIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGYVEDQD
  USA300_FPR3757  GIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWVKVQRDWRNKVNFIRQIGYVEDQD
                  ***********************************************************