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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004248000
- symbol?: ruvA
- synonym:
- description?: Holliday junction DNA helicase RuvA
- Holliday junction DNA helicase RuvA
- Holliday junction branch migration protein RuvA
- crossover junction ATP-dependent DNA helicase RuvA
- crossover junction endodeoxyribonuclease
- Holliday junction ATP-dependent DNA helicase RuvA
- Holliday junction DNA helicase subunit RuvA
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4495966..4496568
- synteny block?: BlockID0032760
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1600 (ruvA)
08BA02176:
C248_1685 (ruvA)
11819-97:
MS7_1657 (ruvA)
6850:
RSAU_001503 (ruvA)
71193:
ST398NM01_1705
ECT-R 2:
ECTR2_1490 (ruvA)
ED133:
SAOV_1639 (ruvA)
ED98:
SAAV_1635 (ruvA)
HO 5096 0412:
SAEMRSA15_15590 (ruvA)
JH1:
SaurJH1_1732 (ruvA)
JH9:
SaurJH9_1699 (ruvA)
JKD6008:
SAA6008_01611 (ruvA)
JKD6159:
SAA6159_01574 (ruvA)
LGA251:
SARLGA251_15440 (ruvA)
M013:
M013TW_1662
MRSA252:
SAR1722 (ruvA)
MSHR1132:
SAMSHR1132_14780
MSSA476:
SAS1578 (ruvA)
Mu3:
SAHV_1629 (ruvA)
Mu50:
SAV1642 (ruvA)
MW2:
MW1592 (ruvA)
RF122:
SAB1511c (ruvA)
ST398:
SAPIG1705 (ruvA)
T0131:
SAT0131_01742
TCH60:
HMPREF0772_11500 (ruvA)
TW20:
SATW20_16360 (ruvA)
USA300_TCH1516:
USA300HOU_1641 (ruvA)
VC40:
SAVC_07455 (ruvA)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLY
N315 MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIRTSLIVREDAQLLY
NCTC8325 MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLY
Newman MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLY
USA300_FPR3757 MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLY
**********************************************:*************
COL GFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTA
N315 GFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTA
NCTC8325 GFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTA
Newman GFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTA
USA300_FPR3757 GFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTA
************************************************************
COL RQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAMLALEALGYSKRELAKVEKTLN
N315 RQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAMLALEALGYSKRELAKVEKTLN
NCTC8325 RQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAMLALEALGYSKRELAKVEKTLN
Newman RQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAMLALEALGYSKRELAKVEKTLN
USA300_FPR3757 RQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAMLALEALGYSKRELAKVEKTLN
************************************************************
COL KNKYDSVDEAVKAGLQLVVS
N315 KNKYDSVDEAVKAGLQLVVS
NCTC8325 KNKYDSVDEAVKAGLQLVVS
Newman KNKYDSVDEAVKAGLQLVVS
USA300_FPR3757 KNKYDSVDEAVKAGLQLVVS
********************