Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004447000
- symbol?: —
- synonym:
- description?: rRNA methyltransferase
- rRNA methyltransferase
- methyltransferase domain-containing protein
- SAM-dependent methyltransferase, putative
- SAM-dependent methyltransferase, MraW methylase family
- conserved protein YtqB
- putative rRNA methylase
- rRNA methylase family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4694900..4695463
- synteny block?: BlockID0034440
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1719
08BA02176:
C248_1808
11819-97:
MS7_1767
6850:
RSAU_001618
71193:
ST398NM01_1814
ECT-R 2:
ECTR2_1601
ED133:
SAOV_1747
ED98:
SAAV_1772
HO 5096 0412:
SAEMRSA15_16690
JH1:
SaurJH1_1851
JH9:
SaurJH9_1816
JKD6008:
SAA6008_01733
JKD6159:
SAA6159_01684
LGA251:
SARLGA251_16510
M013:
M013TW_1777
MRSA252:
SAR1846
MSHR1132:
SAMSHR1132_16110
MSSA476:
SAS1687
Mu3:
SAHV_1749
Mu50:
SAV1763
MW2:
MW1704
RF122:
SAB1621
ST398:
SAPIG1814
T0131:
SAT0131_01873
TCH60:
HMPREF0772_11390
TW20:
SATW20_17510
USA300_TCH1516:
USA300HOU_1752
VC40:
SAVC_08015
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPEGHVYGFDIQDLALENT
N315 MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPEGHVYGFDIQDLALENT
NCTC8325 MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPEGHVYGFDIQDLALENT
Newman MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPEGHVYGFDIQDLALENT
USA300_FPR3757 MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPEGHVYGFDIQDLALENT
************************************************************
COL RDKVKDFNHVSLIKDGHENIEHHINDAHKGHIDAAIFNLGYLPKGDKSIVTKPDTTIQAI
N315 RDKVKDFNHVSLIKDGHENIEHHINDAHKGHIDAAIFNLGYLPKGDKSIVTKPDTTIQAI
NCTC8325 RDKVKDFNHVSLIKDGHENIEHHINDAHKGHIDAAIFNLGYLPKGDKSIVTKPDTTIQAI
Newman RDKVKDFNHVSLIKDGHENIEHHINDAHKGHIDAAIFNLGYLPKGDKSIVTKPDTTIQAI
USA300_FPR3757 RDKVKDFNHVSLIKDGHENIEHHINDAHKGHIDAAIFNLGYLPKGDKSIVTKPDTTIQAI
************************************************************
COL NSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQKHAQVLQYQFLNQRNHAPFI
N315 NSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQKHAQVLQYQFLNQRNHAPFI
NCTC8325 NSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQKHAQVLQYQFLNQRNHAPFI
Newman NSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQKHAQVLQYQFLNQRNHAPFI
USA300_FPR3757 NSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQKHAQVLQYQFLNQRNHAPFI
************************************************************
COL CAIEKIS
N315 CAIEKIS
NCTC8325 CAIEKIS
Newman CAIEKIS
USA300_FPR3757 CAIEKIS
*******