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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006139000
- symbol?: —
- synonym:
- description?: FUSC family protein
- FUSC family protein
- fusaric acid resistance family protein
- integral membrane protein
- membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6211311..6212979
- synteny block?: BlockID0048700
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2447
08BA02176:
C248_2563
11819-97:
MS7_2514
6850:
RSAU_002348
71193:
ST398NM01_2561
ECT-R 2:
ECTR2_2363
ED133:
SAOV_2553c
ED98:
SAAV_2576
HO 5096 0412:
SAEMRSA15_24070
JH1:
SaurJH1_2586
JH9:
SaurJH9_2534
JKD6008:
SAA6008_02546
JKD6159:
SAA6159_02405
LGA251:
SARLGA251_22840
M013:
M013TW_2476
MRSA252:
SAR2588
MSHR1132:
SAMSHR1132_23290
MSSA476:
SAS2396
Mu3:
SAHV_2495
Mu50:
SAV2511
MW2:
MW2429
RF122:
SAB2383c
ST398:
SAPIG2561
T0131:
SAT0131_02710
TCH60:
HMPREF0772_10686
TW20:
SATW20_26300
USA300_TCH1516:
USA300HOU_2498
VC40:
SAVC_11420
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTSLIKINRLNLDFYKGVRQGLLMIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRS
N315 -----------------------MIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRS
NCTC8325 MTSLIKINRLNLDFYKGVRQGLLMIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRS
Newman MTSLIKINRLNLDFYKGVRQGLLMIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRS
USA300_FPR3757 MTSLIKINRLNLDFYKGVRQGLLMIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRS
*************************************
COL KLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVT
N315 KLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVT
NCTC8325 KLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVT
Newman KLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVT
USA300_FPR3757 KLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVT
************************************************************
COL FSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLH
N315 FSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLH
NCTC8325 FSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLH
Newman FSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLH
USA300_FPR3757 FSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLH
************************************************************
COL TYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLEL
N315 TYNDKAAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLEL
NCTC8325 TYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLEL
Newman TYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLEL
USA300_FPR3757 TYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLEL
*****:******************************************************
COL NAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHAN
N315 NAKQIRPLPDELIEMMDHIIAQLDNSDENVRYWRKEVTVTEEFQNLFNHILKIDEMVHAN
NCTC8325 NAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHAN
Newman NAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHAN
USA300_FPR3757 NAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHAN
**************************:*********************************
COL EARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPL
N315 EARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPL
NCTC8325 EARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPL
Newman EARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPL
USA300_FPR3757 EARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPL
************************************************************
COL SAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALFTEALV
N315 SAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALFTEALV
NCTC8325 SAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALFTEALV
Newman SAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALFTEALV
USA300_FPR3757 SAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALFTEALV
************************************************************
COL GANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLGQRTASAL
N315 GANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAIGIVIAIIGLFVLGQRTASVL
NCTC8325 GANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLGQRTASAL
Newman GANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLGQRTASAL
USA300_FPR3757 GANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLGQRTASAL
***************************************:******************.*
COL LPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNAANGELFSDK
N315 LPNVMAEVVRKEATLFHYLFSENQYKDNVYQKNTAMNLSVKLNNMTQVYNAANGELFSDK
NCTC8325 LPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNAANGELFSDK
Newman LPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNAANGELFSDK
USA300_FPR3757 LPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNAANGELFSDK
***************************:********************************
COL TLIQNYYPSLFALEEISFMLNRAMANEDRLTINEQLMGEYLAIFENIAKHFELNTELEIK
N315 TLIQNYYPSLFALEEISFMLNRAMANEDRLTINEQLMGEYLATFENIAKHLELNTELEIK
NCTC8325 TLIQNYYPSLFALEEISFMLNRAMANEDRLTINEQLMGEYLAIFENIAKHFELNTELEIK
Newman TLIQNYYPSLFALEEISFMLNRAMANEDRLTINEQLMGEYLAIFENIAKHFELNTELEIK
USA300_FPR3757 TLIQNYYPSLFALEEISFMLNRAMANEDRLTINEQLMGEYLAIFENIAKHFELNTELEIK
****************************************** *******:*********
COL ILPDLPQYNYIQSAMMNIQHNGFRERDKNV
N315 ILPDLPQYNYIQSAMMNIQHNGFRERDKNV
NCTC8325 ILPDLPQYNYIQSAMMNIQHNGFRERDKNV
Newman ILPDLPQYNYIQSAMMNIQHNGFRERDKNV
USA300_FPR3757 ILPDLPQYNYIQSAMMNIQHNGFRERDKNV
******************************