NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_1944 [new locus tag: SAUSA300_RS10665 ]
- pan locus tag?: SAUPAN001380000
- symbol: SAUSA300_1944
- pan gene symbol?: —
- synonym:
- product: phi77 ORF026-like protein phage transcriptional activator
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_1944 [new locus tag: SAUSA300_RS10665 ]
- symbol: SAUSA300_1944
- product: phi77 ORF026-like protein phage transcriptional activator
- replicon: chromosome
- strand: -
- coordinates: 2110348..2110683
- length: 336
- essential: unknown
⊟Accession numbers[edit | edit source]
- Gene ID: 3914775 NCBI
- RefSeq: YP_494595 NCBI
- BioCyc: see SAUSA300_RS10665
- MicrobesOnline: 1293459 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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121
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241
301ATGCGAGAATATGAATTACTTGAAAGTCATGAACCAGATAATGCGGGAGCTGGCAAAAGT
AATTTGCCGGGTAACCCGATTGAACGATGTGCAATAAAGAAGTTTAGTGATAACAGGTAC
AATACATTAAGAAATATAGTTAACGGTGTAGATAGATTGATAGATGAAAGTGATGAGGAT
ACGCTTGAGTTATTAAGGTTTAGATATTGGGATTGTCCTATTGGTTGTTATGAATGGGAA
GATATAGCACATTACTTTGGTACAAGTAAGACAAGTATATTACGTAGAAGGAATGCACTG
ATCGATAAGTTAGCAAAGTATATTGGTTATGTGTAG60
120
180
240
300
336
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_1944 [new locus tag: SAUSA300_RS10665 ]
- symbol: SAUSA300_1944
- description: phi77 ORF026-like protein phage transcriptional activator
- length: 111
- theoretical pI: 5.23418
- theoretical MW: 12961.5
- GRAVY: -0.662162
⊟Function[edit | edit source]
- TIGRFAM: Mobile and extrachromosomal element functions Prophage functions phage transcriptional regulator, RinA family (TIGR01636; HMM-score: 37.1)Regulatory functions DNA interactions phage transcriptional regulator, RinA family (TIGR01636; HMM-score: 37.1)
- TheSEED :
- Phage integrase regulator RinA
- PFAM: Peptidase_AA (CL0129) Asp_protease; Aspartyl protease (PF09668; HMM-score: 11.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MREYELLESHEPDNAGAGKSNLPGNPIERCAIKKFSDNRYNTLRNIVNGVDRLIDESDEDTLELLRFRYWDCPIGCYEWEDIAHYFGTSKTSILRRRNALIDKLAKYIGYV
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available