NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS09130 [old locus tag: SAUSA300_1672 ]
- pan locus tag?: SAUPAN004385000
- symbol: SAUSA300_RS09130
- pan gene symbol?: ptaA
- synonym:
- product: PTS glucose transporter subunit IIBC
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS09130 [old locus tag: SAUSA300_1672 ]
- symbol: SAUSA300_RS09130
- product: PTS glucose transporter subunit IIBC
- replicon: chromosome
- strand: -
- coordinates: 1837713..1839179
- length: 1467
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (1837713..1839179) NCBI
- BioCyc: SAUSA300_RS09130 BioCyc
- MicrobesOnline: see SAUSA300_1672
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1441ATGTATAAATTTTTCCAAAATTTAGGGCGTTCGTTAATGTTACCAGTTGCCATTTTACCG
GCTGCAGCAATTATTGCCGGAATTGGTAATACGTTAAATGCACTTCATGCGACGCCGAAA
ATCGCAATGTTCTTTACTACGGTAGGTACTACGATTTTAGAGCAATTAGGTATTTTATTT
GCAATTGGTGTAGCTATAGGAATGGCAAAGAAAAATGATGGTGTAGTCGCGCTTGCAGCT
ACGTTAGGATATTTTTTAGTTACAGTTGTATTATCACCAATGAAATTAGCGCCTTTATTA
GGAATGAAAGCTTCGGAAATAAATTCAGCTTTTGAAAAGATGAATAATGGCAATGTCTTT
GTTGGTATTGTAATAGGTTTAATAGCAGCTTATGCATACAATAAGTTTAGTGAAACAGAA
TTACCATTAGCATTATCATTTTTTAGTGGTAAACGTCTAGTTCCAATTATGACTGCATTT
TACTGTACATTTTTAGTTGTCATATTGTTATTCTTATGGCCACTACTTTATTCATGGATT
GTAAAATTTGGTGAATCTATAGTCGGTTTAGGATCGTTTGGAGCTTTCATATATGGTGTT
GCCAATAGATTATTAATTCCTACAGGATTACATCATGCACTGAATAGTGTGTTCTGGTTT
GATACGATTGGTATTAATGATATTGGTAAATTCCAAAGTGGCAAAGATGCTATAAAAGGT
ATTACAGGACGCTATCAAGCGGGATTCTTCCCAATCATGATGTTCGGTATTCCAGCGGCT
GCGTTAGCAATGTATCATACAGCTAAAACTACTCAGAAAAAACAAGTTTACGGTTGGTTC
CTAGCGAGTTCAGTTGCAGCATTTTTCGTTGGTGTTACAGAGCCGATTGAGTTTGCATTT
ATGTTTGTTGCGCCAATCTTATATGTTGTTCATGCGTTATTAACAGGATTATCTTTATTT
ATCGCAGCTACATTCCATTGGACAGCTGGATTTTCATTTAGTGCAGGTTTGATAGATTAT
GTGTTATCACTAATTAATCCAGTATCAAATCATCCATTGATGTTGCTTGTTCAAGGTGTT
GTATTTTTCATCTTATACTATGTGATTTTCCGTGTAGTAATCCAAGTATTTAACTTGAAT
ACGATTGGTAGAGGTGAAAATGAATTAGTTGACCCAACAGTTGTAAAAGATAATATTGCT
CCTGGTGAAAATGATATTAAACAAAGTAAATATCATCAACATGCTATACAAATATTAGAA
GGTTTAGGCGGTCAAGAGAATATTGTTAATTTAACCAATTGTGCAACAAGGTTGCGTCTA
GAGTTAAAAGACACATCTATTATTGATAAACAGAAGATTAAAAACGCCGGTGCAGTTGGT
GTTACTGTTAATGGCAAACATTCAACTCAAGTTATTGTCGGTACACACGTACAGCAGGTT
GCTGATGAAATTGAAAAACATTTATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS09130 [old locus tag: SAUSA300_1672 ]
- symbol: SAUSA300_RS09130
- description: PTS glucose transporter subunit IIBC
- length: 488
- theoretical pI: 9.38912
- theoretical MW: 53114.3
- GRAVY: 0.630123
⊟Function[edit | edit source]
- ⊞reaction: EC 2.7.1.69? ExPASy
- ⊞TIGRFAM: Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, N-acetylglucosamine-specific IIBC component (TIGR01998; EC 2.7.1.69; HMM-score: 711.1)and 11 more
- TheSEED: see SAUSA300_1672
- ⊞PFAM: PTS_EIIC (CL0493) PTS_EIIC; Phosphotransferase system, EIIC (PF02378; HMM-score: 234.4)and 3 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI: 446198516 NCBI
- RefSeq: WP_000276371 NCBI
- UniProt: see SAUSA300_1672
⊟Protein sequence[edit | edit source]
- MYKFFQNLGRSLMLPVAILPAAAIIAGIGNTLNALHATPKIAMFFTTVGTTILEQLGILFAIGVAIGMAKKNDGVVALAATLGYFLVTVVLSPMKLAPLLGMKASEINSAFEKMNNGNVFVGIVIGLIAAYAYNKFSETELPLALSFFSGKRLVPIMTAFYCTFLVVILLFLWPLLYSWIVKFGESIVGLGSFGAFIYGVANRLLIPTGLHHALNSVFWFDTIGINDIGKFQSGKDAIKGITGRYQAGFFPIMMFGIPAAALAMYHTAKTTQKKQVYGWFLASSVAAFFVGVTEPIEFAFMFVAPILYVVHALLTGLSLFIAATFHWTAGFSFSAGLIDYVLSLINPVSNHPLMLLVQGVVFFILYYVIFRVVIQVFNLNTIGRGENELVDPTVVKDNIAPGENDIKQSKYHQHAIQILEGLGGQENIVNLTNCATRLRLELKDTSIIDKQKIKNAGAVGVTVNGKHSTQVIVGTHVQQVADEIEKHL
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available