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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA2170 [new locus tag: SA_RS12460 ]
- pan locus tag?: SAUPAN005907000
- symbol: SA2170
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA2170 [new locus tag: SA_RS12460 ]
- symbol: SA2170
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 2439513..2439935
- length: 423
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1125098 NCBI
- RefSeq: NP_375493 NCBI
- BioCyc: see SA_RS12460
- MicrobesOnline: 104519 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
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361
421ATGAGTAACTCACAAGCAATTCAAGCAATTGAAAACGTGTTAGCAACGTCAAAAGTTGGT
GTATTATCAACTGCATATAATAACAAACCTAATAGTAGATATATGGTCTTTTATAATGAT
GGTCTTACTTTATATACTAAAACGAATATCCATTCTGCTAAGGTCAAAGAAATTAAAGAT
AATCCAGCAGCATATGTTTTGTTAGGCTATAACGACACAACTAATCGTAGTTTCGTTGAA
ATGGAAGCCACGATAGAAGTAGTTACTGATCAAAAAGTAATCGATTGGTTATGGGAGACT
CAAGATAAAAGCTTTTTCAGTTCAAAAGAAGACCCAGAACTTTGTGTTTTAAAGGTGACA
CCACAATCTGTTAAATTGATGAATGACAAATCATTAGATACACCTATCAAAATCGATTTA
TAA60
120
180
240
300
360
420
423
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA2170 [new locus tag: SA_RS12460 ]
- symbol: SA2170
- description: hypothetical protein
- length: 140
- theoretical pI: 4.90619
- theoretical MW: 15816.9
- GRAVY: -0.334286
⊟Function[edit | edit source]
- ⊞TIGRFAM: Unknown function Enzymes of unknown specificity PPOX class probable F420-dependent enzyme (TIGR03618; HMM-score: 27.5)and 3 more
- TheSEED :
- Pyridoxamine 5'-phosphate oxidase like general stress protein
- ⊞PFAM: FMN-binding (CL0336) Putative_PNPOx; Pyridoxamine 5'-phosphate oxidase (PF01243; HMM-score: 56.1)Pyrid_ox_like; Pyridoxamine 5'-phosphate oxidase like (PF16242; HMM-score: 54.2)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MSNSQAIQAIENVLATSKVGVLSTAYNNKPNSRYMVFYNDGLTLYTKTNIHSAKVKEIKDNPAAYVLLGYNDTTNRSFVEMEATIEVVTDQKVIDWLWETQDKSFFSSKEDPELCVLKVTPQSVKLMNDKSLDTPIKIDL
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available