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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL1545 [new locus tag: SACOL_RS07875 ]
- pan locus tag?: SAUPAN004035000
- symbol: SACOL1545
- pan gene symbol?: —
- synonym:
- product: short chain dehydrogenase/reductase oxidoreductase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL1545 [new locus tag: SACOL_RS07875 ]
- symbol: SACOL1545
- product: short chain dehydrogenase/reductase oxidoreductase
- replicon: chromosome
- strand: -
- coordinates: 1581117..1581872
- length: 756
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3237781 NCBI
- RefSeq: YP_186387 NCBI
- BioCyc: see SACOL_RS07875
- MicrobesOnline: 912995 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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721ATGAAAGGACAACATTTTATAGTGACTGGTGGTACGAGTGGTTTAGGTTTATCGATTGTC
CGAAAGTTACTAGAAAATAAAGTGCATGTAACGTTGTTGGTGCGTGATGTTGATAAAGCA
ACTAGAATCTTTGAACAGGAATTGGGGAAAACTATAAATGTTATTCCTTGTGACTTAAAT
GATTTGAAGTCGATACAGGCACTGCAATTTGAAGACAATACATCATTCGATGGATTCATT
TATAGTGCAGGTTTAGGTTATTTCAAATCTATTTCAGACCATAGTTTTTCAGAAATGATT
GAAACGTATCAGCTTAATTTAATTAGTTTTAATGTTTTATATACTGTGTTGAGACCATAT
TTAACATCTAACGCACATATTGTAGGTATTTCAAGTCAAGCTGCATTTTCCACACAAGCA
AATGCTGCACATTATGGGGCATCGAAAGCAGGGTTTTATGCATTAATGAATGCTTTAAGA
CTAGAGTCACCAAACTTACATATCATGACAGTTAATGTTGGCCCGATTGATACACCTTTT
CATCAAAAAGCCGACCCATCAATGAAGTATGCTAAAAAGATGGGGGAAATTATGCTTGAT
GCTAATCAGCTTGCAGAAGATATCATTTATGGCATTAAAACAAAACAATTGGAAATTAAT
CGGCCTAAATGGATGCATCATGCGTTGAAAATGTATCAAATTGCGCCTAGATTTTTTGAA
CGATGTTTCCCTAAATTATTTAAAAATAAAGCATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL1545 [new locus tag: SACOL_RS07875 ]
- symbol: SACOL1545
- description: short chain dehydrogenase/reductase oxidoreductase
- length: 251
- theoretical pI: 9.39542
- theoretical MW: 28270.5
- GRAVY: -0.0992032
⊟Function[edit | edit source]
- ⊞TIGRFAM: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (TIGR04316; EC 1.3.1.28; HMM-score: 50.3)Fatty acid and phospholipid metabolism Biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase (TIGR01830; EC 1.1.1.100; HMM-score: 48.3)and 14 more
- TheSEED :
- Uncharacterized oxidoreductase YqjQ
- ⊞PFAM: NADP_Rossmann (CL0063) adh_short; short chain dehydrogenase (PF00106; HMM-score: 93.5)and 8 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKATRIFEQELGKTINVIPCDLNDLKSIQALQFEDNTSFDGFIYSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYTVLRPYLTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALRLESPNLHIMTVNVGPIDTPFHQKADPSMKYAKKMGEIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFERCFPKLFKNKA
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊞Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊞Other Information[edit | edit source]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
- ↑ Andreas Otto, Jan Maarten van Dijl, Michael Hecker, Dörte Becher
The Staphylococcus aureus proteome.
Int J Med Microbiol: 2014, 304(2);110-20
[PubMed:24439828] [WorldCat.org] [DOI] (I p)