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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS13275 [old locus tag: SAUSA300_2397 ]
- pan locus tag?: SAUPAN006008000
- symbol: SAUSA300_RS13275
- pan gene symbol?: —
- synonym:
- product: MFS transporter
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS13275 [old locus tag: SAUSA300_2397 ]
- symbol: SAUSA300_RS13275
- product: MFS transporter
- replicon: chromosome
- strand: -
- coordinates: 2582237..2583415
- length: 1179
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2582237..2583415) NCBI
- BioCyc: SAUSA300_RS13275 BioCyc
- MicrobesOnline: see SAUSA300_2397
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1141ATGCGACTATTTACATTCATTTTAAGTATTTTTATCGTAGGAATGGTTGAAATGATGGTT
GCAGGAATTATGAACTTGATGAGTCAGGACTTACATGTATCAGAAGCTGTCGTTGGTCAA
TTAGTGACAATGTACGCTTTAACATTTGCGATATGTGGACCTATTCTGGTTAAATTAACG
AACCGTTTTTCATCAAGGCCTGTATTATTATGGACATTACTTATATTTATCATTGGTAAT
GGCATTATTGCTGTAGCGCCAAATTTTTCAATATTAGTAGTTGGTAGAATTATCTCATCT
GCAGCAGCAGCACTAATTATCGTAAAAGTATTAGCTATTACAGCGATGTTATCAGCACCT
AAAAATCGTGGTAAAATGATTGGACTTGTCTATACAGGGTTTAGTGGTGCTAATGTTTTT
GGTGTACCAATTGGAACGGTTATCGGCGATTTAGTAGGTTGGCGCTATACATTTCTATTC
TTAATTATTGTGAGTATTATTGTTGGCTTCTTGATGATGATCTATTTACCGAAGGATCAG
GAAATACAACGAGGCCCTGTGAATCATGAGACACCATCTCATGAAAATCATGTTACTTCG
AAAATATTAAGACCTGCTGAAGTAGCAAAATATTTAATTATTACGTTTTTAGTATTGATT
GCAAACTCAGTGACATTCGTCTTTATAAATCCACTTATTTTATCTAATGGTCATGATATG
TCATTCGTTTCATTAGCACTTCTAGTAAATGGAATCGCTGGCGTTATTGGAACATCATTA
GGTGGTATATTCTCCGATAAAATTACAAGTAAGCGTTGGTTAATGATTTCTGTTTCTATT
TTTATCGTCATGATGTTACTTATGAATTTAATCTTACCTGGTTCAGGTCTATTGTTAGCA
GGACTATTTATTTGGAATATCATGCAATGGAGTACTAATCCAGCAGTGCAAAGCGGTGTG
ATTCAACATGTTGAAGGCGACACAAGCCAAGTAATGAGTTGGAACATGTCTAGTTTAAAC
GCTGGTATTGGTGTTGGAGGCATTATTGGAGGCTTGGTCATGACACATGTTTCTGTTCAA
GCTATCACATATACGAGTGCCATCATTGGCGCATTAGGATTAATCGTTGTTTTCACATTG
AAAAATAATCATTATGCTAAAACATTTAAATCATCATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS13275 [old locus tag: SAUSA300_2397 ]
- symbol: SAUSA300_RS13275
- description: MFS transporter
- length: 392
- theoretical pI: 10.1636
- theoretical MW: 42243.4
- GRAVY: 0.959184
⊟Function[edit | edit source]
- ⊞TIGRFAM: multidrug resistance protein (TIGR00880; HMM-score: 96.1)and 10 more
- TheSEED: see SAUSA300_2397
- ⊞PFAM: MFS (CL0015) MFS_1; Major Facilitator Superfamily (PF07690; HMM-score: 198.7)and 2 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI: see SAUSA300_2397
- RefSeq: WP_001802848 NCBI
- UniProt: see SAUSA300_2397
⊟Protein sequence[edit | edit source]
- MRLFTFILSIFIVGMVEMMVAGIMNLMSQDLHVSEAVVGQLVTMYALTFAICGPILVKLTNRFSSRPVLLWTLLIFIIGNGIIAVAPNFSILVVGRIISSAAAALIIVKVLAITAMLSAPKNRGKMIGLVYTGFSGANVFGVPIGTVIGDLVGWRYTFLFLIIVSIIVGFLMMIYLPKDQEIQRGPVNHETPSHENHVTSKILRPAEVAKYLIITFLVLIANSVTFVFINPLILSNGHDMSFVSLALLVNGIAGVIGTSLGGIFSDKITSKRWLMISVSIFIVMMLLMNLILPGSGLLLAGLFIWNIMQWSTNPAVQSGVIQHVEGDTSQVMSWNMSSLNAGIGVGGIIGGLVMTHVSVQAITYTSAIIGALGLIVVFTLKNNHYAKTFKSS
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available