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NCBI: 06-JUL-2013

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_2304 [new locus tag: NWMN_RS13245 ]
  • pan locus tag?: SAUPAN005936000
  • symbol: NWMN_2304
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_2304 [new locus tag: NWMN_RS13245 ]
  • symbol: NWMN_2304
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2532250..2532432
  • length: 183
  • essential: unknown other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    ATGGTAGAACGTTATATCAAAGTTTTAATATTATATATTTTCACAACACTACTATCTTCT
    ATTTCAGTAACGTCAAAATGTGTACCTAATAAAGTTATAAGGTTTATTTTACGTACTGCA
    ATTGGTTACAGTGTATTTGCATATGGTTTACATTACTTTTCAAATTTAAAAAAGAATAAG
    TAA
    60
    120
    180
    183

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_2304 [new locus tag: NWMN_RS13245 ]
  • symbol: NWMN_2304
  • description: hypothetical protein
  • length: 60
  • theoretical pI: 10.5747
  • theoretical MW: 6962.35
  • GRAVY: 0.531667

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:  
    FIG01107855: hypothetical protein 
  • PFAM:
    no clan definedMyco_arth_vir_N; Mycoplasma virulence signal region (Myco_arth_vir_N) (PF09610; HMM-score: 9.5)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.32
    • Cytoplasmic Membrane Score: 9.55
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helices: 2
  • LocateP: Multi-transmembrane
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular Possibility: 0
    • Signal Peptide Possibility: -0.5
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.221
    • Ymax_pos: 28
    • Cmax: 0.167
    • Cmax_pos: 28
    • Smax: 0.553
    • Smax_pos: 15
    • Smean: 0.318
    • D: 0.259
  • predicted transmembrane helices (TMHMM): 2

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MVERYIKVLILYIFTTLLSSISVTSKCVPNKVIRFILRTAIGYSVFAYGLHYFSNLKKNK

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]