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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS00685 [old locus tag: NWMN_0124 ]
  • pan locus tag?: SAUPAN001019000
  • symbol: NWMN_RS00685
  • pan gene symbol?:
  • synonym:
  • product: 4'-phosphopantetheinyl transferase

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_RS00685 [old locus tag: NWMN_0124 ]
  • symbol: NWMN_RS00685
  • product: 4'-phosphopantetheinyl transferase
  • replicon: chromosome
  • strand: +
  • coordinates: 156210..156854
  • length: 645
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (156210..156854) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
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    481
    541
    601
    ATGACAGTATTTGTAATGCAATTACAGAGTAACTTGAAAAGTATTGAAGAATTAATATCA
    CAAAGTCGTTGGTCATATAAAAAACCGCGTACAGTCAACTATAGATACAATCAAGATAAA
    CTCATGCACAGATTGGGAGATATTTTAGTGCAATATGGAATTCAACATGACACAGGTTTA
    TTACCACATGAATGGCATTATCACATTTCGCCACGAGGTAAGGCAGATATTGTTCAACAC
    AATCGTGATGGACAGCCCATCTATGTGAGCTTATCATATAGTTATCCTTATATCGTGTGT
    GTTGTCGATAAAGAACCAGTTGGTATTGATATCGAAAAGATATCACAACGTTTAGACTGG
    CGTACGTTAGTGACGTGTTTCTCTACAAACGAAGCACATCAAATATGTAGTTTAAATGAT
    TTTTATCAAATATGGACACAAAAAGAAAGTTTTACAAAATTGATTGGTGAAGGTTTAATC
    AAAGGATTGGACATTTATGATATGACACAATCACACTTTTATCAATCACGTGAAGTGAAG
    TTCAAACAATTTATTTTTGATCAGTTTATGGTACAGGTATGTTTCTTAGGACAGGCACCC
    TGGGGTTATAAAAAAGTGTCTGTATTTCAGTTATTGAGTAGTTAA
    60
    120
    180
    240
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    360
    420
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    540
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    645

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_RS00685 [old locus tag: NWMN_0124 ]
  • symbol: NWMN_RS00685
  • description: 4'-phosphopantetheinyl transferase
  • length: 214
  • theoretical pI: 8.29916
  • theoretical MW: 25261.8
  • GRAVY: -0.334579

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Genetic information processingProtein fateProtein modification and repairphosphopantetheine--protein transferase domain (TIGR00556; HMM-score: 23.9)
  • TheSEED:
  • PFAM:
    no clan definedACPS; 4'-phosphopantetheinyl transferase superfamily (PF01648; HMM-score: 33)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.148
    • Ymax_pos: 15
    • Cmax: 0.108
    • Cmax_pos: 28
    • Smax: 0.263
    • Smax_pos: 12
    • Smean: 0.201
    • D: 0.168
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446137869 NCBI
  • RefSeq: WP_000215724 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MTVFVMQLQSNLKSIEELISQSRWSYKKPRTVNYRYNQDKLMHRLGDILVQYGIQHDTGLLPHEWHYHISPRGKADIVQHNRDGQPIYVSLSYSYPYIVCVVDKEPVGIDIEKISQRLDWRTLVTCFSTNEAHQICSLNDFYQIWTQKESFTKLIGEGLIKGLDIYDMTQSHFYQSREVKFKQFIFDQFMVQVCFLGQAPWGYKKVSVFQLLSS

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS00685 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]