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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS04260 [old locus tag: NWMN_0753 ]
  • pan locus tag?: SAUPAN002772000
  • symbol: NWMN_RS04260
  • pan gene symbol?:
  • synonym:
  • product: DUF5067 domain-containing protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_RS04260 [old locus tag: NWMN_0753 ]
  • symbol: NWMN_RS04260
  • product: DUF5067 domain-containing protein
  • replicon: chromosome
  • strand: -
  • coordinates: 846977..847705
  • length: 729
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (846977..847705) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGAAAAAAGTAATGGGGATATTATTAGCAAGTACACTTATCTTAGGTGCTTGTGGACAT
    CATCAAGATAGTGCAAAAAAAGAGAGCACTAGTCACAAAAAGAAAGAAAATGACAATGAA
    GAATTAAATGAAGAACTTAAAGAATTTAAAAGCAAAAAAAATATGGATATAAAAATTAAA
    GGCGATACTATTGTTAGTGACAAATTTGAAGCTAAAATAAAAGAACCGTTTATCATCAAT
    GAAAAAGATGAGAAAAAGAAATATATCGCTTTTAAAATGGAAATTACTGCTAAAAAAGAC
    GATAAAGATTTAAATCCATCTTCTATTTCTCATGACTATATTAATATCACTCAAGATGAT
    AAAAATACAGTAAATAAATTAAGAGATGGTTATCTTTTAAGTGATAAAAAATATAAAGAT
    TGGACAGAACATAACCAAGATCAAATTAAAAAAGGCAAAACTGCACAAGCCATGTTTATC
    TATGAGTTAAGAGGTGATGGAAATATTAATTTAAATGTCCATAAATACTCAGAAGATAAA
    ACAGTTGATTCTAAATCATTCAAATTTAGTAAACTTAAAACCGAAGATTTTTCTCATAGA
    GCGGAAACAAGAGAAGAAGTAGAAAAGAAAGAAAAAGAATTTGAAGAAGAGTACAAAAAA
    GAACAAGAACGAGAGAAAGAAAAAGAAAAGCAAAAAGATGACGACCACAGTGGTTTAGAT
    GAAGTATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    729

Protein[edit source | edit]

Protein Data Bank: 3QFG

General[edit source | edit]

  • locus tag: NWMN_RS04260 [old locus tag: NWMN_0753 ]
  • symbol: NWMN_RS04260
  • description: DUF5067 domain-containing protein
  • length: 242
  • theoretical pI: 6.73788
  • theoretical MW: 28418.7
  • GRAVY: -1.33554

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:
  • PFAM:
    MPT63-MPB63 (CL0524) DUF5067; Domain of unknown function (DUF5067) (PF16729; HMM-score: 72.7)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 4.6
    • Cellwall Score: 2.48
    • Extracellular Score: 2.92
    • Internal Helices: 0
  • LocateP:
  • SignalP: Signal peptide length 27 aa
    • Ymax: 0.427
    • Ymax_pos: 27
    • Cmax: 0.23
    • Cmax_pos: 28
    • Smax: 0.906
    • Smax_pos: 21
    • Smean: 0.76
    • D: 0.557
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446680060 NCBI
  • RefSeq: WP_000757406 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MKKVMGILLASTLILGACGHHQDSAKKESTSHKKKENDNEELNEELKEFKSKKNMDIKIKGDTIVSDKFEAKIKEPFIINEKDEKKKYIAFKMEITAKKDDKDLNPSSISHDYINITQDDKNTVNKLRDGYLLSDKKYKDWTEHNQDQIKKGKTAQAMFIYELRGDGNINLNVHKYSEDKTVDSKSFKFSKLKTEDFSHRAETREEVEKKEKEFEEEYKKEQEREKEKEKQKDDDHSGLDEV

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS04260 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]