NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS06720 [old locus tag: NWMN_1193 ]
- pan locus tag?: SAUPAN003586000
- symbol: NWMN_RS06720
- pan gene symbol?: cinA
- synonym:
- product: competence protein CinA
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: NWMN_RS06720 [old locus tag: NWMN_1193 ]
- symbol: NWMN_RS06720
- product: competence protein CinA
- replicon: chromosome
- strand: +
- coordinates: 1314863..1316014
- length: 1152
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_009641 (1314863..1316014) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACC
AACGGACAATTTCTATCTAAAGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAA
GTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTACGTCATGCGCTAGAAAAATAT
GATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAA
AGCTATTTTGAGGAACAAGGACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTA
ATTGAAGGTTCAACTGTATTAACAAATCATCATGGCATGGCTCCAGGAATGATGGTGAAT
TTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTA
AGATTTGCGGGAATAGGTGAATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAA
CAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATGAAGTATATATTAGATTGACT
GCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTA
ATAAAGAAAATTCATGAACCTTTTGTAATATATGATGGTATTACTAATGGTGCTTTATAT
CATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGGGTATGATTAATCACAATGAA
AACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTTCAT
ATAGGCTATGATAATAACTTTGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGA
AATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAAGATTATTAAATTGGCTTAGA
ACAACAAATTAA60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
960
1020
1080
1140
1152
⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: NWMN_RS06720 [old locus tag: NWMN_1193 ]
- symbol: NWMN_RS06720
- description: competence protein CinA
- length: 383
- theoretical pI: 6.19719
- theoretical MW: 43267.2
- GRAVY: -0.27389
⊟Function[edit source | edit]
- reaction:
- TIGRFAM: DNA metabolismDNA replication, recombination, and repaircompetence/damage-inducible protein CinA N-terminal domain (TIGR00200; HMM-score: 284.7)molybdenum cofactor synthesis domain (TIGR00177; HMM-score: 110.5)Biosynthesis of cofactors, prosthetic groups, and carriersMolybdopterinmolybdenum cofactor biosynthesis protein B (TIGR02667; HMM-score: 26.3)
- TheSEED:
- PFAM: no clan definedMoCF_biosynth; Probable molybdopterin binding domain (PF00994; HMM-score: 117.5)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.199
- Ymax_pos: 21
- Cmax: 0.136
- Cmax_pos: 21
- Smax: 0.422
- Smax_pos: 18
- Smean: 0.259
- D: 0.222
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHTVAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMVKNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEILDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFVNKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- NWMN_RS06720 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]