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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS14410 [old locus tag: NWMN_2511 ]
  • pan locus tag?: SAUPAN006316000
  • symbol: NWMN_RS14410
  • pan gene symbol?:
  • synonym:
  • product: GbsR/MarR family transcriptional regulator

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_RS14410 [old locus tag: NWMN_2511 ]
  • symbol: NWMN_RS14410
  • product: GbsR/MarR family transcriptional regulator
  • replicon: chromosome
  • strand: +
  • coordinates: 2759123..2759686
  • length: 564
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (2759123..2759686) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGACTCGTTCTCAGAACAAACAGCAACAATTAGAACAAGCAAAAGATATTGTAATTAAT
    TCAATTGGACAGACAATGGATTTGTATGGCACTAATAGAAGTGTAGGAAACTTATATGGC
    ACAATGGTGTTTGAAGGCAGTATGACGCTTGATGAAATGCGTCATCAATTGCAAATGAGC
    AAACCAAGTATGAGTGCTGGCGTTAAGAAATTGCAGGAATTTGATATTGTTAAACAACAA
    TTTACGAGAGGAAGCCGCAAACAACATTTTATCGCCGAGAAAGACTTTTTCATCTTTTTC
    CGAAACTTTTTCACTAAAAAATTCCAGCGTGAAATTGACATCAATGTCGAAGCAGTAAAA
    GATGCTCAAGCTATTATCAATTCATTACTTGAAAGCAGTGATTTAACTGAAGCTGAAACA
    CAAGAGGCACAAAAAATTAAAGCTCAGCTTGATCATACACATGTTTATTACGAATGGTTA
    GAACAGTTAACCGAAGCGATTGAAAGCGGTGAAATTTTCAAATATTTCCCAATTCCAGAA
    CAGCCTTCTGATTCTGAAAATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    564

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_RS14410 [old locus tag: NWMN_2511 ]
  • symbol: NWMN_RS14410
  • description: GbsR/MarR family transcriptional regulator
  • length: 187
  • theoretical pI: 4.9468
  • theoretical MW: 21732.3
  • GRAVY: -0.627807

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    MetabolismAmino acid biosynthesisAromatic amino acid familyanthranilate synthase component I (TIGR01820; EC 4.1.3.27; HMM-score: 15.7)
    Signal transductionRegulatory functionsDNA interactionsCRISPR locus-related DNA-binding protein (TIGR01884; HMM-score: 11.9)
  • TheSEED:
  • PFAM:
    HTH (CL0123) HTH_20; Helix-turn-helix domain (PF12840; HMM-score: 13.8)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.15
    • Ymax_pos: 15
    • Cmax: 0.123
    • Cmax_pos: 15
    • Smax: 0.241
    • Smax_pos: 8
    • Smean: 0.178
    • D: 0.161
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446120746 NCBI
  • RefSeq: WP_000198601 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MTRSQNKQQQLEQAKDIVINSIGQTMDLYGTNRSVGNLYGTMVFEGSMTLDEMRHQLQMSKPSMSAGVKKLQEFDIVKQQFTRGSRKQHFIAEKDFFIFFRNFFTKKFQREIDINVEAVKDAQAIINSLLESSDLTEAETQEAQKIKAQLDHTHVYYEWLEQLTEAIESGEIFKYFPIPEQPSDSEN

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS14410 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]