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NCBI: 26-AUG-2013

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA0651 [new locus tag: SA_RS03715 ]
  • pan locus tag?: SAUPAN002580000
  • symbol: SA0651
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA0651 [new locus tag: SA_RS03715 ]
  • symbol: SA0651
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 744970..745422
  • length: 453
  • essential: no DEG other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    ATGACAGTAAAAAATTTATTTTTAGGCTTTGTTGCTGTAATATTAACCGTTTGTTTAATT
    GGTTTATTAATATTAGCAACAAATGAAGATGCGCTTGCTAAGGTACATAAAACAATTAAT
    ACGCTTAACGCGATAAATGTATCAACTGAAGATACTTATAAAAAGAAAATGGATATTCTC
    AATATTCATACTGCTAAAGCATCTGAAGTGAATGAAAATGTGGAAAAGCAAAATCATTTT
    AAACATCGTGTGAATGCAAATAAATCAAATTCTTTTAACGAACAAGAGTGCCAAGTTATT
    GCTGATCGTTATGCAGATAAGCATATCAATGATAATTATGGTTTAGAAAGAATTTCTAAG
    ACAAATCATGGATATAATTATGTTTATTCCAATGATAATTCAACTAGTAAGCAACATGTA
    AGTATTTCAAATCAAGGCATAATAACGAAATAA
    60
    120
    180
    240
    300
    360
    420
    453

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA0651 [new locus tag: SA_RS03715 ]
  • symbol: SA0651
  • description: hypothetical protein
  • length: 150
  • theoretical pI: 8.66817
  • theoretical MW: 16923
  • GRAVY: -0.448667

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:  
    FIG01108521: hypothetical protein 
  • PFAM:
    no clan definedSYCE1; Synaptonemal complex central element protein 1 (PF15233; HMM-score: 14)
    ABC-2 (CL0181) ABC2_membrane_3; ABC-2 family transporter protein (PF12698; HMM-score: 12.8)
    no clan definedSarcolipin; Sarcolipin (PF05366; HMM-score: 8.6)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 3.33
    • Cellwall Score: 3.33
    • Extracellular Score: 3.33
    • Internal Helix: 1
  • LocateP: N-terminally anchored (with CS)
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular Possibility: 0.17
    • Signal Peptide Possibility: 0.5
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: EDALAKVH
  • SignalP: Signal peptide length 34 aa
    • Ymax: 0.593
    • Ymax_pos: 34
    • Cmax: 0.617
    • Cmax_pos: 34
    • Smax: 0.7
    • Smax_pos: 26
    • Smean: 0.518
    • D: 0.564
  • predicted transmembrane helices (TMHMM): 1

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MTVKNLFLGFVAVILTVCLIGLLILATNEDALAKVHKTINTLNAINVSTEDTYKKKMDILNIHTAKASEVNENVEKQNHFKHRVNANKSNSFNEQECQVIADRYADKHINDNYGLERISKTNHGYNYVYSNDNSTSKQHVSISNQGIITK

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]