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NCBI: 26-AUG-2013

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA0720 [new locus tag: SA_RS04100 ]
  • pan locus tag?: SAUPAN002689000
  • symbol: SA0720
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA0720 [new locus tag: SA_RS04100 ]
  • symbol: SA0720
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 824108..825019
  • length: 912
  • essential: no DEG other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGATAATAATGAAAAAGAAAAAAGTAAAAGTGAACTATTAGTTGTAACAGGTTTATCT
    GGAGCAGGTAAATCTTTGGTTATTCAATGTTTAGAAGACATGGGATATTTTTGTGTAGAT
    AATCTACCACCAGTGTTATTGCCTAAATTTGTAGAGTTGATGGAACAAGGAAATCCATCC
    TTAAGAAAAGTGGCAATTGCAATTGATTTAAGAGGTAAGGAACTATTTAATTCATTAGTT
    GCAGTAGTGGATAAAGTTAAAAGTGAAAGTGACGTCATCATTGATGTTATGTTTTTAGAA
    GCAAGTACTGAAAAATTAATTTCAAGATATAAAGAAACGCGTCGTGCACATCCTTTGATG
    GAACAAGGTAAAAGATCCTTAATTAATGCAATTAATGATGAGCGAGAGCATTTGTCTCAA
    ATTAGAAGTATAGCTAATTTTGTTATAGATACTACAAAGTTATCACCTAAAGAATTAAAA
    GAACGCATTCGTCGATACTATGAAGATGAAGAGTTTGAAACTTTTACAATTAATGTCACA
    AGTTTCGGTTTTAAACATGGAATTCAGATGGATGCAGATTTAGTATTTGATGTACGATTT
    TTACCAAATCCATATTATGTAGTAGATTTAAGACCTTTAACAGGATTAGATAAAGACGTT
    TATAATTATGTTATGAAATGGAAAGAGACGGAGATTTTCTTTGAAAAATTAACTGATTTG
    TTAGATTTTATGATACCCGGGTATAAAAAAGAAGGGAAATCTCAATTAGTAATTGCCATC
    GGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTA
    AATGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGC
    GAGAAAAAATGA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    912

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA0720 [new locus tag: SA_RS04100 ]
  • symbol: SA0720
  • description: hypothetical protein
  • length: 303
  • theoretical pI: 5.71204
  • theoretical MW: 34811.8
  • GRAVY: -0.30066

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    MetabolismTransport and binding proteinsAnionsphosphonate ABC transporter, ATP-binding protein (TIGR02315; EC 3.6.3.28; HMM-score: 15.2)
    MetabolismCentral intermediary metabolismSulfur metabolismadenylyl-sulfate kinase (TIGR00455; EC 2.7.1.25; HMM-score: 14.7)
  • TheSEED:  
    RNase adapter protein RapZ 
  • PFAM:
    P-loop_NTPase (CL0023) ATP_bind_2; P-loop ATPase protein family (PF03668; HMM-score: 360)
    AAA_18; AAA domain (PF13238; HMM-score: 16.7)
    AAA_22; AAA domain (PF13401; HMM-score: 16.3)
    SKI; Shikimate kinase (PF01202; HMM-score: 16.1)
    DnaB_C; DnaB-like helicase C terminal domain (PF03796; HMM-score: 15.4)
    no clan definedPGM_PMM_II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II (PF02879; HMM-score: 14.8)
    P-loop_NTPase (CL0023) AAA_16; AAA ATPase domain (PF13191; HMM-score: 14.7)
    ABC_tran; ABC transporter (PF00005; HMM-score: 14.7)
    no clan definedDUF1186; Protein of unknown function (DUF1186) (PF06685; HMM-score: 14.5)
    P-loop_NTPase (CL0023) AAA_33; AAA domain (PF13671; HMM-score: 14.5)
    RsgA_GTPase; RsgA GTPase (PF03193; HMM-score: 12.3)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular Possibility: 1
    • Signal Peptide Possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.166
    • Ymax_pos: 11
    • Cmax: 0.12
    • Cmax_pos: 68
    • Smax: 0.388
    • Smax_pos: 2
    • Smean: 0.267
    • D: 0.205
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]