Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002689000
- symbol?: —
- synonym:
- description?: RNase adaptor protein RapZ
- RNase adaptor protein RapZ
- P-loop-containing kinase, putative
- RNase adapter RapZ
- ATP-binding protein UPF0042, contains P-loop
- glmZ(sRNA)-inactivating NTPase
- P-loop ATPase family protein
- putative P-loop ATPase/kinase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3183787..3184698
- synteny block?: BlockID0019210
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0743
08BA02176:
C248_0853
11819-97:
MS7_0815
6850:
RSAU_000740
71193:
ST398NM01_0842
ECT-R 2:
ECTR2_715
ED133:
SAOV_0803
ED98:
SAAV_0729
HO 5096 0412:
SAEMRSA15_06910
JH1:
SaurJH1_0806
JH9:
SaurJH9_0790
JKD6008:
SAA6008_00780
JKD6159:
SAA6159_00722
LGA251:
SARLGA251_06980
M013:
M013TW_0752
MRSA252:
SAR0820
MSHR1132:
SAMSHR1132_07100
MSSA476:
SAS0730
Mu3:
SAHV_0762
Mu50:
SAV0765
MW2:
MW0727
RF122:
SAB0719
ST398:
SAPIG0842
T0131:
SAT0131_00837
TCH60:
HMPREF0772_12415
TW20:
SATW20_08400
USA300_TCH1516:
USA300HOU_0794
VC40:
SAVC_03470
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPS
N315 MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPS
NCTC8325 MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPS
Newman MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPS
USA300_FPR3757 MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPS
************************************************************
COL LRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLM
N315 LRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLM
NCTC8325 LRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLM
Newman LRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLM
USA300_FPR3757 LRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLM
************************************************************
COL EQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVT
N315 EQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVT
NCTC8325 EQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVT
Newman EQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVT
USA300_FPR3757 EQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVT
************************************************************
COL SFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDL
N315 SFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDL
NCTC8325 SFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDL
Newman SFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDL
USA300_FPR3757 SFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDL
************************************************************
COL LDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESG
N315 LDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESG
NCTC8325 LDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESG
Newman LDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESG
USA300_FPR3757 LDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESG
************************************************************
COL EKK
N315 EKK
NCTC8325 EKK
Newman EKK
USA300_FPR3757 EKK
***