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NCBI: 26-AUG-2013

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA1534 [new locus tag: SA_RS08635 ]
  • pan locus tag?: SAUPAN004364000
  • symbol: SA1534
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA1534 [new locus tag: SA_RS08635 ]
  • symbol: SA1534
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1753170..1754117
  • length: 948
  • essential: no DEG other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAGAACAACAAACAATTATGGAACGCTTGTTTCATACATTAGATGAAAAAGCTAAA
    ACATTAAATAATGAAAATGGCCAAAGTTTTATTGAAAATCTTGGGCTAGCAATGGAACAA
    GTATATACCAATGAAAGAGGATTGTTAGAACAATCGACGTTACAAGATCGACGTAAAGCA
    TTCCAATTTGCATATTTAAGTTTAATGCAGGAAGAAAAGATACAAGCAAATCATCAAATT
    ACACCAGATTCAATTGGATTGATACTAGGATTTTTAGTTGAGCGTTTTATGAACAACCAA
    GAAGAATTACATATTGTTGATATTGCAAGTGGTGCCGGTCATTTAAGTGCTACTGTAAAA
    GAAGTGTTACCTGAAATTGCGGTTATGCATCATTTAATTGAAGTTGATCCAGTTTTATCA
    CGTGTTAGTGTACATTTAGCAAACTTCTTAGAAATTCCTTTCGATGTGTATCCTCAAGAT
    GCCATCATGCCACTACCATTAGAAGAAGCAGATATCGTTATTGGTGATTTTCCAGTAGGC
    TATTATCCAATTGATGAAAGAAGTAAGGAGTTTAAGCTAGGTTTTGAAGAAGGACATAGT
    TATTCACATTATTTATTAATAGAACAAGCAATAAATGCATTAAAAGATGCTGGATATGCC
    TTTCTAGTGGTACCAAGTAATATTTTTACAGGTGAACATGTAAAACAGCTTGAAAAATAT
    ATTGCAACAGAGACAGAGATGCAAGCATTTTTAAATTTACCACCAACTTTATTTAAAAAT
    GAAAAAGCGCGAAAATCTATATTAATTTTACAAAAGAAAAAATCGGGTGAAACAAAGCCA
    GTTGAAGTATTATTGGCAAATATTCCTGATTTCAAAAATCCTTCACAATTTCAAGGATTT
    ATGACAGAGTTAAATCAGTGGATGGACACAAATCGTCCTAAAAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    948

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA1534 [new locus tag: SA_RS08635 ]
  • symbol: SA1534
  • description: hypothetical protein
  • length: 315
  • theoretical pI: 4.84817
  • theoretical MW: 35947.9
  • GRAVY: -0.258413

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Genetic information processingDNA metabolismRestriction/modificationtype I restriction-modification system, M subunit (TIGR00497; EC 2.1.1.72; HMM-score: 14.5)
    Genetic information processingProtein fateProtein modification and repairprotein-(glutamine-N5) methyltransferase, release factor-specific (TIGR03534; EC 2.1.1.-; HMM-score: 11.8)
  • TheSEED:  
    CBSS-257314.1.peg.752 Adenine-specific methyltransferase (EC 2.1.1.72) 
  • PFAM:
    NADP_Rossmann (CL0063) N6_Mtase; N-6 DNA Methylase (PF02384; HMM-score: 38.6)
    MTS; Methyltransferase small domain (PF05175; HMM-score: 22.2)
    RrnaAD; Ribosomal RNA adenine dimethylase (PF00398; HMM-score: 18.2)
    Methyltransf_32; Methyltransferase domain (PF13679; HMM-score: 13.6)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular Possibility: 1
    • Signal Peptide Possibility: -1
    • N-terminally Anchored Score: -1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.13
    • Ymax_pos: 20
    • Cmax: 0.119
    • Cmax_pos: 20
    • Smax: 0.223
    • Smax_pos: 18
    • Smean: 0.127
    • D: 0.129
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MAEQQTIMERLFHTLDEKAKTLNNENGQSFIENLGLAMEQVYTNERGLLEQSTLQDRRKAFQFAYLSLMQEEKIQANHQITPDSIGLILGFLVERFMNNQEELHIVDIASGAGHLSATVKEVLPEIAVMHHLIEVDPVLSRVSVHLANFLEIPFDVYPQDAIMPLPLEEADIVIGDFPVGYYPIDERSKEFKLGFEEGHSYSHYLLIEQAINALKDAGYAFLVVPSNIFTGEHVKQLEKYIATETEMQAFLNLPPTLFKNEKARKSILILQKKKSGETKPVEVLLANIPDFKNPSQFQGFMTELNQWMDTNRPKK

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]