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NCBI: 26-AUG-2013

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA1731 [new locus tag: SA_RS09935 ]
  • pan locus tag?: SAUPAN004948000
  • symbol: SA1731
  • pan gene symbol?: pheA
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA1731 [new locus tag: SA_RS09935 ]
  • symbol: SA1731
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1982526..1983320
  • length: 795
  • essential: no DEG other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGCAATTATATTATTTAGGCCCTAAAGGTACATTTTCATATTTGGCTTGTCGTCAGTAT
    TTTTCTGAAAATGAAGCAACTTTTCAACCAAAGTCAAATTTATTTGAAGTCATCAAGGCA
    GTTGCAGATGATGACACATCGATTGGTGTTGTCCCTATTGAAAATTCTATAGAAGGAACA
    ATCAACATTGTGGCAGATGCACTTGCACAGCAAGATGTCTTTGCACACGGTGAAATACGT
    TTAGATATTAACTTTGCATTATATGGTAATGGAACAGATTCCATTTCTGATATTAAAAAA
    GTGTATTCTATTGCACCAGCAATCAGTCAAACAACAAATTACATACATCAACATCAATTT
    GACTATGATTATGTCGACAGTACAATTCAAAGTTTGACTAAAATTGAAAATGGCGTTGCA
    GCAATTGCACCTTTAGGTAGTGGCGAAGCTTATGGTTTTACACCTATTGATACACATATT
    GAAGACTATCCACATAACGTGACACGTTTTTTAGTTATAAAAAATCAGCAGCAATTTGAT
    CAAAATGCGACATCATTGATGTTTTTAATTACACCAATGCATGATAAACCTGGGCTGTTA
    GCAAGTGTGCTTAATACATTTGCTTTGTTTAATATTAATTTATCCTGGATTGAGTCTCGT
    CCTTTAAAAACACAATTAGGTATGTATCGATTTTTCGTTCAGGCTGATTCTGCAATTACA
    ACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATT
    GGTGCTTTTAATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    795

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA1731 [new locus tag: SA_RS09935 ]
  • symbol: SA1731
  • description: hypothetical protein
  • length: 264
  • theoretical pI: 4.50653
  • theoretical MW: 29473.2
  • GRAVY: 0

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    phenylalanine-4-hydroxylase (TIGR01268; EC 1.14.16.1; HMM-score: 37.1)
  • TheSEED:  
    Amino Acids and DerivativesAromatic amino acids and derivativesChorismate Synthesis Prephenate dehydratase (EC 4.2.1.51) 
    Aromatic amino acids and derivativesPhenylalanine and Tyrosine Branches from Chorismate Prephenate dehydratase (EC 4.2.1.51) 
    Regulation and Cell signalingRegulation and Cell signaling - no subcategoryCell envelope-associated LytR-CpsA-Psr transcriptional attenuators Prephenate dehydratase (EC 4.2.1.51) 
  • PFAM:
    PBP (CL0177) PDT; Prephenate dehydratase (PF00800; HMM-score: 143.3)
    ACT (CL0070) ACT; ACT domain (PF01842; HMM-score: 28.1)
    no clan definedDUF16; Protein of unknown function DUF16 (PF01519; HMM-score: 17.2)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.67
    • Cytoplasmic Membrane Score: 0.01
    • Cellwall Score: 0.15
    • Extracellular Score: 0.17
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular Possibility: 1
    • Signal Peptide Possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.126
    • Ymax_pos: 29
    • Cmax: 0.121
    • Cmax_pos: 43
    • Smax: 0.215
    • Smax_pos: 20
    • Smean: 0.136
    • D: 0.13
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADDDTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIRLDINFALYGNGTDSISDIKKVYSIAPAISQTTNYIHQHQFDYDYVDSTIQSLTKIENGVAAIAPLGSGEAYGFTPIDTHIEDYPHNVTRFLVIKNQQQFDQNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKVIAILETLDFKVEMIGAFN

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]