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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS06145 [old locus tag: SACOL1200 ]
  • pan locus tag?: SAUPAN003457000
  • symbol: SACOL_RS06145
  • pan gene symbol?:
  • synonym:
  • product: laccase

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS06145 [old locus tag: SACOL1200 ]
  • symbol: SACOL_RS06145
  • product: laccase
  • replicon: chromosome
  • strand: +
  • coordinates: 1206875..1207591
  • length: 717
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (1206875..1207591) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATTACAACTAGAGGAGATGGTTTAAGTGACTATCCTAAAAATGCTTTTAATATGGCGAGA
    TATATTGATGATCGCCCATATAATATTACTCAACATCAATTGCAATTAGCTGAAGAAATT
    GCGTTTGATAGAAAAAATTGGGTGTTTCCCATTCAAACACATGAAAATAAAGTCGCTTGT
    ATTACAAAGGATGATATAGGCACAAATATAGACACTTTAACTGATGCGCTTCATGGTATT
    GATGCGATGTACACATATGATAGTAATGTCTTATTAACGATGTGTTATGCAGACTGTGTA
    CCAGTATATTTTTATAGTACAAAACATCATTTTATTGCATTGGCGCATGCAGGTTGGCGT
    GGTACCTATACTGAAATTGTAAAAGAAGTGCTAAAACATGTGAACTTTGATTTGAAAGAC
    TTACATGTCGTTATTGGACCATCTACATCATCAAGTTATGAAATTAATGATGATATTAAA
    AATAAATTTGAAACATTGCCAATTGATAGTGCCAACTATATTGAAACTAGAGGACGAGAT
    CGTCATGGTATTGATTTGAAAAAAGCCAATGCTGCATTATTAATTTATTATGGTGTTCCT
    AAAGAAAATATTTATACGACAGCGTATGCTACATCTGAACATTTAGAATTATTTTTCTCT
    TATCGATTAGAAAAAGGTCAAACAGGACGCATGTTAGCATTCATTGGTCAACAGTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    717

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS06145 [old locus tag: SACOL1200 ]
  • symbol: SACOL_RS06145
  • description: laccase
  • length: 238
  • theoretical pI: 6.16977
  • theoretical MW: 27266.6
  • GRAVY: -0.377311

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Unknown functionGeneralYfiH family protein (TIGR00726; HMM-score: 150.4)
  • TheSEED:
  • PFAM:
    no clan definedCu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase (PF02578; HMM-score: 181.8)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.098
    • Ymax_pos: 69
    • Cmax: 0.111
    • Cmax_pos: 38
    • Smax: 0.113
    • Smax_pos: 2
    • Smean: 0.079
    • D: 0.09
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI:
  • RefSeq: WP_076035578 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MTTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQLAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMCYADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEINDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAALLIYYGVPKENIYTTAYATSEHLELFFSYRLEKGQTGRMLAFIGQQ

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS06145 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]