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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS06625 [old locus tag: SACOL1298 ]
  • pan locus tag?: SAUPAN003580000
  • symbol: SACOL_RS06625
  • pan gene symbol?:
  • synonym:
  • product: peptidase M16

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS06625 [old locus tag: SACOL1298 ]
  • symbol: SACOL_RS06625
  • product: peptidase M16
  • replicon: chromosome
  • strand: +
  • coordinates: 1314509..1315795
  • length: 1287
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (1314509..1315795) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGAAAGAGCGTTATTATGAATTAATAGACGAAAGAGTATTCGAACAAGAATTAGAAAAT
    GGTTTACGATTATTTATTATCCCCAAACCAGGTTTTCAAAAGACATTTGTCACTTACACT
    ACACAATTTGGTTCATTAGATAATCAATTCAAACCCCTTGGACAAGACCAATTTGTTACT
    GTACCTGATGGAGTTGCTCACTTTTTAGAACATAAATTATTTGAAAAAGAAGAAGAAGAC
    TTATTTACTGCGTTTGCTGAAGATAACGCACAAGCAAATGCGTTTACAAGCTTTGATCGT
    ACAAGCTACTTGTTCAGTGCAACTGATAATATTGAAAACAACATTAAACGTTTACTTACA
    ATGGTTGAAACGCCTTATTTTACAAAAGAAACTGTTGATAAAGAAAAAGGTATTATTGCA
    GAAGAAATAAAAATGTATCAAGAGCAACCTGGATATAAATTAATGTTTGATACATTGCGT
    GCAATGTATCAACAACATCCAATACGTGTTGATATTGCCGGTAGTGTAGAAAGTATATAC
    GATATTACAAAAGATGATTTGTATCTATGTTATGAAACGTTTTATCATCCATCAAATATG
    GTTTTATTTGTTGTTGGCGATGTGGATCCTGAAGCAATATGTCGAATAGTAAAACAACAC
    GAGGATGCTCGTAATAAAGTTAACCAACCCAAAATCGAACGAGGACTTGTTGATGAACCG
    GAGGATGTTAAAGAAGCATTTGTTACTGAATCTATGAAAATTCAATCACCAAGACTAATG
    CTTGGTTTTAAAAATAAACCATTACAAGAAGCGCCTCAAAAATATGTACAACGTGATTTA
    GAAATGTCATTATTCTTTGAGTTAATTTTTGGGGAAGAAACAGATTTTTATCAGAATTTA
    TTAAACGAAGGACTTATCGATGATACATTTGGTTATCAATTTGTACTAGAGCCGACGTAT
    AGTTTTTCAATCGTGACAAGTGCTACTGAAGAACCAGATAAATTAAAAAAATTATTATTA
    GATGAGTTGCGTGATAAAAAAGGCAATTTCCAAGATGCAGAAGCATTTGAACTTTTGAAA
    AAGCAATTTATAGGTGAATTCATATCAAGTTTAAACTCACCTGAATATATTGCTAATCAA
    TATACTAAATTGTATTTTGAAGGTGTTAGCGTGTTTGACATGTTAGACATTGTTGAAAAT
    ATCACGTTAGATAGTATTAACGAAACGTCATCGTTATATTTAAATTTAGATCAGCAAGTC
    GATAGTCGTTTGGAGATTAAAAAGTAA
    60
    120
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    540
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    840
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    1020
    1080
    1140
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    1260
    1287

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS06625 [old locus tag: SACOL1298 ]
  • symbol: SACOL_RS06625
  • description: peptidase M16
  • length: 428
  • theoretical pI: 4.27653
  • theoretical MW: 49910
  • GRAVY: -0.428738

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    MetabolismBiosynthesis of cofactors, prosthetic groups, and carriersOthercoenzyme PQQ biosynthesis protein PqqF (TIGR02110; EC 3.4.24.-; HMM-score: 40.3)
  • TheSEED:
  • PFAM:
    Peptidase_ME (CL0094) Peptidase_M16_C; Peptidase M16 inactive domain (PF05193; HMM-score: 89.2)
    Peptidase_M16; Insulinase (Peptidase family M16) (PF00675; HMM-score: 55.2)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.097
    • Ymax_pos: 40
    • Cmax: 0.112
    • Cmax_pos: 34
    • Smax: 0.138
    • Smax_pos: 33
    • Smean: 0.07
    • D: 0.086
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446587418 NCBI
  • RefSeq: WP_000664764 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MKERYYELIDERVFEQELENGLRLFIIPKPGFQKTFVTYTTQFGSLDNQFKPLGQDQFVTVPDGVAHFLEHKLFEKEEEDLFTAFAEDNAQANAFTSFDRTSYLFSATDNIENNIKRLLTMVETPYFTKETVDKEKGIIAEEIKMYQEQPGYKLMFDTLRAMYQQHPIRVDIAGSVESIYDITKDDLYLCYETFYHPSNMVLFVVGDVDPEAICRIVKQHEDARNKVNQPKIERGLVDEPEDVKEAFVTESMKIQSPRLMLGFKNKPLQEAPQKYVQRDLEMSLFFELIFGEETDFYQNLLNEGLIDDTFGYQFVLEPTYSFSIVTSATEEPDKLKKLLLDELRDKKGNFQDAEAFELLKKQFIGEFISSLNSPEYIANQYTKLYFEGVSVFDMLDIVENITLDSINETSSLYLNLDQQVDSRLEIKK

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS06625 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]