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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS06650 [old locus tag: SACOL1303 ]
  • pan locus tag?: SAUPAN003586000
  • symbol: SACOL_RS06650
  • pan gene symbol?: cinA
  • synonym:
  • product: competence protein CinA

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS06650 [old locus tag: SACOL1303 ]
  • symbol: SACOL_RS06650
  • product: competence protein CinA
  • replicon: chromosome
  • strand: +
  • coordinates: 1318681..1319832
  • length: 1152
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (1318681..1319832) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
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    841
    901
    961
    1021
    1081
    1141
    ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACC
    AACGGACAATTTCTATCTAAAGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAA
    GTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTACGTCATGCGCTAGAAAAATAT
    GATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
    GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAA
    AGCTATTTTGAGGAACAAGGACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTA
    ATTGAAGGTTCAACTGTATTAACAAATCATCATGGCATGGCTCCAGGAATGATGGTGAAT
    TTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
    AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTA
    AGATTTGCGGGAATAGGTGAATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAA
    CAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATGAAGTATATATTAGATTGACT
    GCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
    CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTA
    ATAAAGAAAATTCATGAACCTTTTGTAATATATGATGGTATTACTAATGGTGCTTTATAT
    CATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGGGTATGATTAATCACAATGAA
    AACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
    AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTTCAT
    ATAGGCTATGATAATAACTTTGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGA
    AATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAAGATTATTAAATTGGCTTAGA
    ACAACAAATTAA
    60
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    840
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    1140
    1152

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS06650 [old locus tag: SACOL1303 ]
  • symbol: SACOL_RS06650
  • description: competence protein CinA
  • length: 383
  • theoretical pI: 6.19719
  • theoretical MW: 43267.2
  • GRAVY: -0.27389

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Genetic information processingDNA metabolismDNA replication, recombination, and repaircompetence/damage-inducible protein CinA N-terminal domain (TIGR00200; HMM-score: 284.7)
    molybdenum cofactor synthesis domain (TIGR00177; HMM-score: 110.5)
    MetabolismBiosynthesis of cofactors, prosthetic groups, and carriersMolybdopterinmolybdenum cofactor biosynthesis protein B (TIGR02667; HMM-score: 26.3)
  • TheSEED:
  • PFAM:
    no clan definedMoCF_biosynth; Probable molybdopterin binding domain (PF00994; HMM-score: 117.5)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.199
    • Ymax_pos: 21
    • Cmax: 0.136
    • Cmax_pos: 21
    • Smax: 0.422
    • Smax_pos: 18
    • Smean: 0.259
    • D: 0.222
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 445942506 NCBI
  • RefSeq: WP_000020361 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHTVAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMVKNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEILDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFVNKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS06650 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]