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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS07120 [old locus tag: SACOL1399 ]
  • pan locus tag?: SAUPAN003756000
  • symbol: SACOL_RS07120
  • pan gene symbol?: dmpI
  • synonym:
  • product: tautomerase

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS07120 [old locus tag: SACOL1399 ]
  • symbol: SACOL_RS07120
  • product: tautomerase
  • replicon: chromosome
  • strand: -
  • coordinates: 1409699..1409884
  • length: 186
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (1409699..1409884) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    ATGCCAATCGTCAATGTAAAATTATTAGAAGGTCGTTCGGATGAACAATTAAAAAATTTA
    GTTAGCGAAGTAACTGACGCCGTAGAAAAAACAACGGGGGCAAATAGACAAGCAATTCAC
    GTTGTTATAGAAGAAATGAAACCAAACCATTATGGTGTGGCTGGCGTAAGAAAGTCAGAT
    CAATAA
    60
    120
    180
    186

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS07120 [old locus tag: SACOL1399 ]
  • symbol: SACOL_RS07120
  • description: tautomerase
  • length: 61
  • theoretical pI: 6.51944
  • theoretical MW: 6743.63
  • GRAVY: -0.467213

Function[edit source | edit]

  • reaction:
    EC 5.3.2.-?  ExPASy
  • TIGRFAM:
    MetabolismEnergy metabolismOther4-oxalocrotonate tautomerase family enzyme (TIGR00013; EC 5.3.2.-; HMM-score: 79.2)
  • TheSEED:
  • PFAM:
    MIF (CL0082) Tautomerase; Tautomerase enzyme (PF01361; HMM-score: 85.5)
    Tautomerase_2; Tautomerase enzyme (PF14552; HMM-score: 24.2)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.128
    • Ymax_pos: 28
    • Cmax: 0.124
    • Cmax_pos: 28
    • Smax: 0.181
    • Smax_pos: 11
    • Smean: 0.136
    • D: 0.131
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 447046020 NCBI
  • RefSeq: WP_001123276 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSDQ

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS07120 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]