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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS12640 [old locus tag: SACOL2409 ]
  • pan locus tag?: SAUPAN005945000
  • symbol: SACOL_RS12640
  • pan gene symbol?: fmhA
  • synonym:
  • product: aminoacyltransferase

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS12640 [old locus tag: SACOL2409 ]
  • symbol: SACOL_RS12640
  • product: aminoacyltransferase
  • replicon: chromosome
  • strand: +
  • coordinates: 2468541..2469791
  • length: 1251
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (2468541..2469791) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACAACAAAGCATTTTTCA
    CATTACACACAATCAGCTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCAT
    CTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGATGCTTATTGACAGAAGCA
    CGCACACTTAAATTTTTCAAATATTTTTATACACATCGCGGGCCAGTGATGGATTATACA
    AATCAATCATTAGTAGCATTTTTCTTTAAAGCATTAACGTCATATTTAAAGAAACACAAT
    TGTTTATATGTCCTTGTAGATCCATATTTAATTGAAAATTTACGCAATGCAGACGGTGAA
    ATTGTTAAATCTTATGATAACCGAGCATTTGTTAGAACAATGGATAAATTAGGTTATAAA
    CACCAAGGTTTCCCTGTAGGTTATGATTCAATGAGCCAAATCCGTTGGCTGTCAGTGTTA
    GATTTAAAAGATAAGACTGAAGACCAACTTTTAAAAGAAATGGATTATCAAACGAGACGT
    AATATTAAAAAAACATATGATATTGGTGTCAAAACTAAAACGTTAACGATTGATGAAACG
    CAAACTTTTTTCGACTTATTCCATATGGCTGAGGAAAAGCACGGTTTCAAATTCCGTGAG
    TTACCATACTTTGAAGAAATGCAAAAGTTATACGATGACCACGCCATGTTAAAGTTGGCG
    TATATTGATTTAAACGAGTATTTAAAAACGTTACAATTAAAGCAACAACAATTAACAGCT
    GAACTCTCAGGTGTTGAAGAAGCATTGGAAGAAAGTCCTAATTCAAAGAAAAATAAAACG
    AAACGCACACAGCTAGAACAACAGCTAAATAGCAATAAGCGTAAAATCGACAATACAATA
    GAACAAATTGAACAAGATGGTGCAGTCTTAAACTTAGCTTCTGCTTTATTTATCTACAAT
    GAGCATGAAGTTTATTACTTATCTAGTGGTTCAAACCCTAAATATAATGCTTATATGGGT
    GCCTACCATTTGCAGTGGGAAATGATTAAGTTTGCTAAAGCGCATCATATTGATCGCTAT
    AATTTTTATGGTATTACCGGTGACTTTTCAGAGTCATCAGAAGACTATGGCGTCCAACAA
    TTCAAAAAAGGTTTTAACGCACATGTAGAAGAGTATATCGGTGACTTTATTAAGCCTATC
    AAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1251

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS12640 [old locus tag: SACOL2409 ]
  • symbol: SACOL_RS12640
  • description: aminoacyltransferase
  • length: 416
  • theoretical pI: 7.55524
  • theoretical MW: 48924.1
  • GRAVY: -0.609135

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Unknown functionGeneralFemAB-related protein, PEP-CTERM system-associated (TIGR03019; HMM-score: 21.9)
  • TheSEED:
  • PFAM:
    Acetyltrans (CL0257) FemAB; FemAB family (PF02388; HMM-score: 499.7)
    Acetyltransf_6; Acetyltransferase (GNAT) domain (PF13480; HMM-score: 26.1)
    no clan definedBaculo_PEP_C; Baculovirus polyhedron envelope protein, PEP, C terminus (PF04513; HMM-score: 13.7)
    DUF2203; Uncharacterized conserved protein (DUF2203) (PF09969; HMM-score: 12.8)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.128
    • Ymax_pos: 20
    • Cmax: 0.126
    • Cmax_pos: 20
    • Smax: 0.173
    • Smax_pos: 19
    • Smean: 0.133
    • D: 0.13
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446934966 NCBI
  • RefSeq: WP_001012222 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MNFVTLTSDEFNAFTTKHFSHYTQSAIHYNHRVDLKGDVHLVGVKDDNGQVIAGCLLTEARTLKFFKYFYTHRGPVMDYTNQSLVAFFFKALTSYLKKHNCLYVLVDPYLIENLRNADGEIVKSYDNRAFVRTMDKLGYKHQGFPVGYDSMSQIRWLSVLDLKDKTEDQLLKEMDYQTRRNIKKTYDIGVKTKTLTIDETQTFFDLFHMAEEKHGFKFRELPYFEEMQKLYDDHAMLKLAYIDLNEYLKTLQLKQQQLTAELSGVEEALEESPNSKKNKTKRTQLEQQLNSNKRKIDNTIEQIEQDGAVLNLASALFIYNEHEVYYLSSGSNPKYNAYMGAYHLQWEMIKFAKAHHIDRYNFYGITGDFSESSEDYGVQQFKKGFNAHVEEYIGDFIKPIKPLLYKVQTYLNHKRR

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS12640 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]