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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS13995 [old locus tag: SACOL2672 ]
  • pan locus tag?: SAUPAN006384000
  • symbol: SACOL_RS13995
  • pan gene symbol?: asp3
  • synonym:
  • product: accessory Sec system protein Asp3

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS13995 [old locus tag: SACOL2672 ]
  • symbol: SACOL_RS13995
  • product: accessory Sec system protein Asp3
  • replicon: chromosome
  • strand: -
  • coordinates: 2742705..2743664
  • length: 960
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (2742705..2743664) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
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    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGCTGAAAAACAAAACATTTAAAGTTACTTGGAATTATATTTCACAAACTACATTTATG
    TATGGCTCTAAAGTATCATTTTCAAATGGTGAAGTGACTTTTATAAATCCTTTGATGCCC
    TCTGGATTACCGATTCATGAGTGGTTGATGTTAAAGCAATTTTCAAAATATAAAAGTGCG
    CCAAGTTTACCAATTTTGCGTAGAGGACAGCATTATAAATTGCATTTTGATTTTGATGCA
    ACGCCTGCTGGTTCAGTGTATTTTATCATCATTTTTTATAATAAAAATGGCACAAAACTA
    AGTACTGAGATTGTAAAGTCAAATAGTATTACGATTCAATATCCTGATGAAGCCTATGCT
    TATAAAATAAAAATGATGAATGCAGCATCGACGAGTCTTATATTTAGATGTTTAACAATC
    ACAGAGATGACGCATCAATATGATTTAGAGTATAAAAGCATGCGGGTGACGAAGATAGGC
    GATGACCAATATGGAAATGATATGATCAATGTCATTATTGCAGAACCATCTGACACCTAT
    CCAACTATTTCGAATGATTTTTTGAAACTGTTTGGTCATGTTTGGCTCGTTGAACGTTGG
    ATGGACGACAATATCGAGGGAAATATTAAGCAACTAAAGAATGATTTGCAAAGTCAAGAT
    ACCCTAAAGGCTATTAATTTGATTAGTTATGGGTCAAAGTCAAATGTTTTTGCAACTTAT
    GTCGCTCAGCATTTGGGTTGCAAAGTGTATCGTACAAGCCATGAAGATGATGATTTAAAA
    GGATGGCTTACAGAACATGTCCCAGGAAATCATGAACTAAAAGATACAAATGTCGAGGTT
    TATTTTAAAGAAGAGCAAGACAAACATCTAAATTATATGTCACGTTTAATGAATCCAGTA
    CGATTTTTAGATTACTTAGATGTATCGAAACTGAATGGTGGGGAAGTAAATGAAACATAA
    60
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Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS13995 [old locus tag: SACOL2672 ]
  • symbol: SACOL_RS13995
  • description: accessory Sec system protein Asp3
  • length: 319
  • theoretical pI: 6.86271
  • theoretical MW: 36926.8
  • GRAVY: -0.412539

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Cellular processesCellular processesPathogenesisaccessory Sec system protein Asp3 (TIGR03711; HMM-score: 183.1)
    Genetic information processingProtein fateProtein and peptide secretion and traffickingaccessory Sec system protein Asp3 (TIGR03711; HMM-score: 183.1)
  • TheSEED:
  • PFAM:
    no clan definedSec-ASP3; Accessory Sec secretory system ASP3 (PF15432; HMM-score: 143.9)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.149
    • Ymax_pos: 11
    • Cmax: 0.129
    • Cmax_pos: 31
    • Smax: 0.272
    • Smax_pos: 1
    • Smean: 0.21
    • D: 0.173
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446839486 NCBI
  • RefSeq: WP_000916742 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MLKNKTFKVTWNYISQTTFMYGSKVSFSNGEVTFINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFYNKNGTKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITEMTHQYDLEYKSMRVTKIGDDQYGNDMINVIIAEPSDTYPTISNDFLKLFGHVWLVERWMDDNIEGNIKQLKNDLQSQDTLKAINLISYGSKSNVFATYVAQHLGCKVYRTSHEDDDLKGWLTEHVPGNHELKDTNVEVYFKEEQDKHLNYMSRLMNPVRFLDYLDVSKLNGGEVNET

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS13995 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]