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NCBI: 03-AUG-2016

Summary[edit source | edit]

  • organism: Staphylococcus aureus NCTC8325
  • locus tag: SAOUHSC_00979
  • pan locus tag?: SAUPAN003241000
  • symbol: SAOUHSC_00979
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SAOUHSC_00979
  • symbol: SAOUHSC_00979
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 951200..951751
  • length: 552
  • essential: no DEG other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    GTGATACGTCAAGCACGTCCAGAGGACCGATTTGATATTGCGAAGTTAGTTTATATGGTT
    TGGGATGATATGGAATTAGAATTGGTAAAGCATCTACCTAAAGACATGGTATTAGATGCA
    ATTGAAAAAAGCTGTGTTGATGCAACATATCGAACTTTTTATCAGCATATTTTAGTTTAT
    GAAGTAGAAAATAAAGTAGCAGGTTGTATTATTAGCTATAGTGGTGAAAATGAATTGAAA
    TACGAAAAAGCATGGGAACTACTTGACTTGCCAGAAAAAATAAAACAATATGGCACGCCA
    TTACCTGTAAAAGAAGCTAAAGACGATGAGTATTATATAGAAACAATTGCGACATTTGCA
    GCATATAGAGGTAGAGGCATCGCGACAAAGTTATTAACGTCATTACTTGAATCAAATACA
    CATGTTAAATGGAGTTTGAATTGCGATATTAATAATGAAGCAGCATTAAAGTTATATAAA
    AAAGTAGGCTTTATATCTGATGGACAGATTGAATTATACAAGCACATGTATCATCATTTA
    ATTGTTAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    552

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SAOUHSC_00979
  • symbol: SAOUHSC_00979
  • description: hypothetical protein
  • length: 183
  • theoretical pI: 5.95504
  • theoretical MW: 21356.5
  • GRAVY: -0.29235

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Genetic information processingProtein synthesisRibosomal proteins: synthesis and modificationribosomal-protein-alanine acetyltransferase (TIGR01575; EC 2.3.1.128; HMM-score: 32.7)
    Cellular processesCellular processesAdaptations to atypical conditionsdiaminobutyrate acetyltransferase (TIGR02406; EC 2.3.1.178; HMM-score: 16.9)
    MetabolismBiosynthesis of cofactors, prosthetic groups, and carriersGlutathione and analogsmycothiol synthase (TIGR03448; EC 2.3.1.189; HMM-score: 12.3)
  • TheSEED:  
    Acetyltransferase (GNAT family) SAS0976 
  • PFAM:
    Acetyltrans (CL0257) Acetyltransf_1; Acetyltransferase (GNAT) family (PF00583; HMM-score: 42.4)
    Acetyltransf_7; Acetyltransferase (GNAT) domain (PF13508; HMM-score: 38)
    Acetyltransf_10; Acetyltransferase (GNAT) domain (PF13673; HMM-score: 29.7)
    GNAT_acetyltran; GNAT acetyltransferase (PF12746; HMM-score: 22.8)
    Acetyltransf_3; Acetyltransferase (GNAT) domain (PF13302; HMM-score: 17.7)
    OB_enterotoxin (CL0658) Pertussis_S2S3; Pertussis toxin, subunit 2 and 3, C-terminal domain (PF02918; HMM-score: 17.4)
    Acetyltrans (CL0257) FR47; FR47-like protein (PF08445; HMM-score: 16.8)
    Acetyltransf_9; Acetyltransferase (GNAT) domain (PF13527; HMM-score: 16.8)
    Acetyltransf_CG; GCN5-related N-acetyl-transferase (PF14542; HMM-score: 15.5)
    Acetyltransf_13; ESCO1/2 acetyl-transferase (PF13880; HMM-score: 12.7)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular Possibility: 1
    • Signal Peptide Possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.09
    • Ymax_pos: 70
    • Cmax: 0.105
    • Cmax_pos: 40
    • Smax: 0.12
    • Smax_pos: 3
    • Smean: 0.063
    • D: 0.08
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MIRQARPEDRFDIAKLVYMVWDDMELELVKHLPKDMVLDAIEKSCVDATYRTFYQHILVYEVENKVAGCIISYSGENELKYEKAWELLDLPEKIKQYGTPLPVKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLESNTHVKWSLNCDINNEAALKLYKKVGFISDGQIELYKHMYHHLIVK

Experimental data[edit source | edit]

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SAOUHSC_00979 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]