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Summary[edit source | edit]

  • pan ID?: SAUPAN000014000
  • symbol?: hutH
  • description?: histidine ammonia-lyase

      descriptions from strain specific annotations:

    • histidine ammonia-lyase
    • putative histidine ammonia-lyase
  • strand?: +
  • coordinates?: 16725..17895
  • synteny block?: BlockID0000110
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0008 (hutH)
    N315:
    SA0008 (hutH)
    NCTC8325:
    Newman:
    NWMN_0007 (hutH)
    USA300_FPR3757:
    04-02981:
    SA2981_0008 (hutH)
    08BA02176:
    C248_0008 (hutH)
    11819-97:
    MS7_0008 (hutH)
    71193:
    ST398NM01_0008
    ECT-R 2:
    ECTR2_8 (hutH)
    ED133:
    SAOV_0008 (hutH)
    ED98:
    SAAV_0008 (hutH)
    HO 5096 0412:
    SAEMRSA15_00080 (hutH)
    JH1:
    SaurJH1_0008
    JH9:
    SaurJH9_0008
    JKD6008:
    SAA6008_00008 (hutH)
    JKD6159:
    SAA6159_00008 (hutH)
    LGA251:
    SARLGA251_00080 (hutH)
    M013:
    M013TW_0009
    MRSA252:
    SAR0008 (hutH)
    MSHR1132:
    SAMSHR1132_00080
    MSSA476:
    SAS0008 (hutH)
    Mu3:
    SAHV_0008 (hutH)
    Mu50:
    SAV0008 (hutH)
    MW2:
    MW0008 (hutH)
    RF122:
    SAB0008 (hutH)
    ST398:
    SAPIG0008 (hutH)
    T0131:
    SAT0131_00008
    TCH60:
    HMPREF0772_10460 (hutH)
    TW20:
    SATW20_00080 (hutH)
    USA300_TCH1516:
    USA300HOU_0008 (hutH)
    VC40:
    SAVC_00040

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFG
    N315            MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFG
    NCTC8325        MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFG
    Newman          MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFG
    USA300_FPR3757  MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFG
                    ************************************************************

    COL             LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR
    N315            LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR
    NCTC8325        LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR
    Newman          LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR
    USA300_FPR3757  LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR
                    ************************************************************

    COL             QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNR
    N315            QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNR
    NCTC8325        QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNR
    Newman          QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNR
    USA300_FPR3757  QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNR
                    ************************************************************

    COL             QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV
    N315            QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV
    NCTC8325        QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV
    Newman          QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV
    USA300_FPR3757  QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV
                    ************************************************************

    COL             HAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ
    N315            HSVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ
    NCTC8325        HAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ
    Newman          HAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ
    USA300_FPR3757  HAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ
                    *:***************************:******************************

    COL             LEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV
    N315            LEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV
    NCTC8325        LEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV
    Newman          LEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV
    USA300_FPR3757  LEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV
                    ************************************************************

    COL             NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM
    N315            NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM
    NCTC8325        NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM
    Newman          NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM
    USA300_FPR3757  NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM
                    ************************************************************

    COL             GTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYDEFRSIVPSITHDR
    N315            GTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYEEFRSIVPSITHDR
    NCTC8325        GTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYDEFRSIVPSITHDR
    Newman          GTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYDEFRSIVPSITHDR
    USA300_FPR3757  GTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYDEFRSIVPSITHDR
                    **********************************************:*************

    COL             QFHKDIEAVAQYLKQSIYQTTACH
    N315            QFHKDIEAVAQYLKQSIYQTTACH
    NCTC8325        QFHKDIEAVAQYLKQSIYQTTACH
    Newman          QFHKDIEAVAQYLKQSIYQTTACH
    USA300_FPR3757  QFHKDIEAVAQYLKQSIYQTTACH
                    ************************