⊟Summary

• pan ID^?: SAUPAN001036000
• symbol^?: —
• description^?: transcriptional regulator

  descriptions from strain specific annotations:

  • transcriptional regulator
  • RpiR family phosphosugar-binding transcriptional regulator
  • RpiR family transcriptional regulator
  • phosphosugar-binding transcriptional regulator, RpiR family
  • transcription regulator RpiR family
  • Sialic acid utilization regulator, RpiR family
  • RpiR family transcription regulator
  • RpiR family transcripitonal regulator
  • Transcriptional regulator, RpiR family
  • helix-turn-helix domain, rpiR family protein
• strand^?: +
• coordinates^?: 1311372..1312250
• synteny block^?: BlockID0005630
• occurrence^?: in 100% of 32 strains

⊟Orthologs

COL:
SACOL0179
N315:
SA0187
NCTC8325:
SAOUHSC_00160
Newman:
NWMN_0137
USA300_FPR3757:
SAUSA300_0195
04-02981:
SA2981_0194
08BA02176:
C248_0185
11819-97:
MS7_0186
71193:
ST398NM01_0211
ECT-R 2:
ECTR2_156
ED133:
SAOV_0138
ED98:
SAAV_0162
HO 5096 0412:
SAEMRSA15_01580
JH1:
SaurJH1_0183
JH9:
SaurJH9_0178
JKD6008:
SAA6008_00172
JKD6159:
SAA6159_00175
LGA251:
SARLGA251_01640
M013:
M013TW_0181
MRSA252:
SAR0194
MSHR1132:
SAMSHR1132_01680
MSSA476:
SAS0168
Mu3:
SAHV_0192
Mu50:
SAV0193
MW2:
MW0167
RF122:
SAB0133
ST398:
SAPIG0211
T0131:
SAT0131_00188
TCH60:
HMPREF0772_10305
TW20:
SATW20_02030
USA300_TCH1516:
USA300HOU_0207
VC40:
SAVC_00735

⊟Genome Viewer

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.205)
  
  
  COL             -MTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADVTNVSTASIVRFSRKM
  N315            -MTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADVTNVSTASIVRFSRKM
  NCTC8325        -MTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADVTNVSTASIVRFSRKM
  Newman          MMTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADVTNVSTASIVRFSRKM
  USA300_FPR3757  -MTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADVTNVSTASIVRFSRKM
                   ***********************************************************
  
  COL             THQGFQELKIAISRYLPEDIATNPHLELIENESVETLKNKMIARATNTMRFVATNIMDAQ
  N315            THQGFQELKIAISRYLPEDIATNPHLELIENESVETLKNKMIARATNTMRFVATNIMDAQ
  NCTC8325        THQGFQELKIAISRYLPEDIATNPHLELIENESVETLKNKMIARATNTMRFVATNIMDAQ
  Newman          THQGFQELKIAISRYLPEDIATNPHLELIENESVETLKNKMIARATNTMRFVATNIMDAQ
  USA300_FPR3757  THQGFQELKIAISRYLPEDIATNPHLELIENESVETLKNKMIARATNTMRFVATNIMDAQ
                  ************************************************************
  
  COL             IDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDDRD
  N315            IDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDDRD
  NCTC8325        IDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDDRD
  Newman          IDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDDRD
  USA300_FPR3757  IDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDDRD
                  ************************************************************
  
  COL             CMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPVAQIADYALIYGRTDENEMRMA
  N315            CMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPVAQIADYALIYGRTDENEMRMA
  NCTC8325        CMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPVAQIADYALIYGRTDENEMRMA
  Newman          CMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPVAQIADYALIYGRTDENEMRMA
  USA300_FPR3757  CMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPVAQIADYALIYGRTDENEMRMA
                  ************************************************************
  
  COL             ATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMALDNYRKHLATIDFKH
  N315            ATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMALDNYRKHLATIDFKH
  NCTC8325        ATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMALDNYRKHLATIDFKH
  Newman          ATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMALDNYRKHLATIDFKH
  USA300_FPR3757  ATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMALDNYRKHLATIDFKH
                  ****************************************************