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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001095000
- symbol?: fadE
- synonym:
- description?: long-chain-fatty-acid--CoA ligase
- long-chain-fatty-acid--CoA ligase
- acyl--CoA ligase
- acyl-CoA synthetase, putative
- acyl-CoA synthetase FadE
- acyl-CoA synthetase FadE-like protein
- acyl-CoA synthetase
- AMP-binding protein
- AMP-dependent synthetase and ligase
- long-chain acyl-CoA synthetase
- long-chain-fatty-acid--CoA ligase, putative
- o-succinylbenzoate--CoA ligase
- putative acyl-CoA synthetase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1371994..1373508
- synteny block?: BlockID0006170
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0234
08BA02176:
C248_0218 (fadE)
11819-97:
MS7_0220
6850:
RSAU_000179 (fadE)
71193:
ST398NM01_0244
ECT-R 2:
ECTR2_194
ED133:
SAOV_0171
ED98:
SAAV_0199
HO 5096 0412:
SAEMRSA15_01920 (fadE)
JH1:
SaurJH1_0224
JH9:
SaurJH9_0218
JKD6008:
SAA6008_00203
JKD6159:
SAA6159_00208
LGA251:
SARLGA251_01980 (fadE)
M013:
M013TW_0213
MRSA252:
SAR0226 (fadE)
MSHR1132:
SAMSHR1132_01990
MSSA476:
SAS0210
Mu3:
SAHV_0233
Mu50:
SAV0234
MW2:
MW0210
RF122:
SAB0173c
ST398:
SAPIG0244
T0131:
SAT0131_00221
TCH60:
HMPREF0772_10271 (menE)
TW20:
SATW20_02350 (fadE)
USA300_TCH1516:
USA300HOU_0243
VC40:
SAVC_00910
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYLTSQGVKKGDVIGIFAP
N315 MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYLTSQGVKKGDVIGIFAP
NCTC8325 MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYLTSQGVKKGDVIGIFAP
Newman MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYLTSQGVKKGDVIGIFAP
USA300_FPR3757 MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYLTSQGVKKGDVIGIFAP
************************************************************
COL NDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKLLFYAEKHLSSLTDIDQNL
N315 NDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKLLFYAEKHLSSLTDIDQNL
NCTC8325 NDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKLLFYAEKHLSSLTDIDQNL
Newman NDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKLLFYAEKHLSSLTDIDQNL
USA300_FPR3757 NDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKLLFYAEKHLSSLTDIDQNL
************************************************************
COL LHMDIDVAQYDEIVNPDYHQPFQATPVEPQDLAALIYTSGTTGSPKGVMFSYESFVHNGA
N315 LHMDIDVAQYDEIVNPDYHQPFQATPVEPQDLAALIYTSGTTGSPKGVMFSYESFVHNGA
NCTC8325 LHMDIDVAQYDEIVNPDYHQPFQATPVEPQDLAALIYTSGTTGSPKGVMFSYESFVHNGA
Newman LHMDIDVAQYDEIVNPDYHQPFQATPVEPQDLAALIYTSGTTGSPKGVMFSYESFVHNGA
USA300_FPR3757 LHMDIDVAQYDEIVNPDYHQPFQATPVEPQDLAALIYTSGTTGSPKGVMFSYESFVHNGA
************************************************************
COL NLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGGTLILQRYFNGEELNDMIAQYHP
N315 NLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGGTLILQRYFNGEELNDMIAQYHP
NCTC8325 NLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGGTLILQRYFNGEELNDMIAQYHP
Newman NLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGGTLILQRYFNGEELNDMIAQYHP
USA300_FPR3757 NLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGGTLILQRYFNGEELNDMIAQYHP
************************************************************
COL TFIIMIPTMYYSTLRASNFNPENFRAMDYIIQGGSQPLPSIQAAFKQYGINIINGYGLTE
N315 TFIIMIPTMYYSTLRASNFNPENFRAMDYIIQGGSQPLPSIQAAFKQYGINIINGYGLTE
NCTC8325 TFIIMIPTMYYSTLRASNFNPENFRAMDYIIQGGSQPLPSIQAAFKQYGINIINGYGLTE
Newman TFIIMIPTMYYSTLRASNFNPENFRAMDYIIQGGSQPLPSIQAAFKQYGINIINGYGLTE
USA300_FPR3757 TFIIMIPTMYYSTLRASNFNPENFRAMDYIIQGGSQPLPSIQAAFKQYGINIINGYGLTE
************************************************************
COL APLVLVNTPENSKRKPMSIGKAVMFVDARILDDNGEEVPTGEIGELAIKAKNVTPGYWNK
N315 APLVLVNTPENSKRKPMSIGKAVMFVDARILDDNGEEVPTGEIGELAIKAKNVTPGYWNK
NCTC8325 APLVLVNTPENSKRKPMSIGKAVMFVDARILDDNGEEVPTGEIGELAIKAKNVTPGYWNK
Newman APLVLVNTPENSKRKPMSIGKAVMFVDARILDDNGEEVPTGEIGELAIKAKNVTPGYWNK
USA300_FPR3757 APLVLVNTPENSKRKPMSIGKAVMFVDARILDDNGEEVPTGEIGELAIKAKNVTPGYWNK
************************************************************
COL PAETAKAFHGRYLLTGDLAKMDNDGDIFIIDRKKELIITGGENVLPSEVENALAEHPLVD
N315 PAETAKAFHGRYLLTGDLAKMDDDGDIFIIDRKKELIITGGENVLPSEVENALAEHPLVD
NCTC8325 PAETAKAFHGRYLLTGDLAKMDNDGDIFIIDRKKELIITGGENVLPSEVENALAEHPLVD
Newman PAETAKAFHGRYLLTGDLAKMDNDGDIFIIDRKKELIITGGENVLPSEVENALAEHPLVD
USA300_FPR3757 PAETAKAFHGRYLLTGDLAKMDNDGDIFIIDRKKELIITGGENVLPSEVENALAEHPLVD
**********************:*************************************
COL RCVVVGYDHPKYGESIAAAIILREDEPHYAEILNQHMRSRLAGYKVPRMYVPVTHMPLNS
N315 RCVVVGYDHPKYGESIAAAIILREDEPHYAEILDQHMRSRLAGYKVPRMYVPVTHMPLNS
NCTC8325 RCVVVGYDHPKYGESIAAAIILREDEPHYAEILNQHMRSRLAGYKVPRMYVPVTHMPLNS
Newman RCVVVGYDHPKYGESIAAAIILREDEPHYAEILNQHMRSRLAGYKVPRMYVPVTHMPLNS
USA300_FPR3757 RCVVVGYDHPKYGESIAAAIILREDEPHYAEILNQHMRSRLAGYKVPRMYVPVTHMPLNS
*********************************:**************************
COL TQKPDKLAIRQMMNDKVSQTL
N315 TQKPDKLAIRQMMNDKVSQTL
NCTC8325 TQKPDKLAIRQMMNDKVSQTL
Newman TQKPDKLAIRQMMNDKVSQTL
USA300_FPR3757 TQKPDKLAIRQMMNDKVSQTL
*********************