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Summary[edit source | edit]

  • pan ID?: SAUPAN001222000
  • symbol?:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 1510025..1510423
  • synteny block?: BlockID0007330
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0303
    08BA02176:
    C248_0292
    11819-97:
    MS7_0294
    71193:
    ST398NM01_0317
    ECT-R 2:
    ECTR2_264
    ED133:
    SAOV_0256
    ED98:
    SAAV_0271
    HO 5096 0412:
    SAEMRSA15_02600
    JH1:
    SaurJH1_0294
    JH9:
    SaurJH9_0287
    JKD6008:
    SAA6008_00280
    JKD6159:
    SAA6159_00279
    LGA251:
    SARLGA251_02660
    M013:
    M013TW_0285
    MRSA252:
    SAR0301
    MSHR1132:
    SAMSHR1132_02780
    MSSA476:
    SAS0281
    Mu3:
    SAHV_0301
    Mu50:
    SAV0304
    MW2:
    MW0281
    RF122:
    SAB0241
    ST398:
    SAPIG0317
    T0131:
    SAT0131_00304
    TCH60:
    HMPREF0772_10192
    TW20:
    SATW20_03090
    USA300_TCH1516:
    USA300HOU_0323
    VC40:
    SAVC_01270

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MEKSIKIMTIIGIVVQGLATVFSLLLMVLAASGVMTTDVSTTVNGEVDPVDAETAAAIFT
    N315            MEKSIKIMTIIGIVIQGLATVFSLLLMVLAASGVMTTDVSTTVNGEVDPVDAETAAAIFT
    NCTC8325        MEKSIKIMTIIGIVVQGLATVFSLLLMVLAASGVMTTDVSTTVNGEVDPVDAETAAAIFT
    Newman          MEKSIKIMTIIGIVVQGLATVFSLLLMVLAASGVMTTDVSTTVNGEVDPVDAETAAAIFT
    USA300_FPR3757  MEKSIKIMTIIGIVVQGLATVFSLLLMVLAASGVMTTDVSTTVNGEVDPVDAETAAAIFT
                    **************:*********************************************

    COL             VLFLSLFIFGIISIILGAIGMFKASKNKKMSGILLIIGAVISGNIITFALWLISGIKLLT
    N315            VLFLSLFIFGIISIILGAIGMFKASKNKKMSGILLIIGAVISGNIITFALWLVSGIKLLT
    NCTC8325        VLFLSLFIFGIISIILGAIGMFKASKNKKMSGILLIIGAVISGNIITFALWLISGIKLLT
    Newman          VLFLSLFIFGIISIILGAIGMFKASKNKKMSGILLIIGAVISGNIITFALWLISGIKLLT
    USA300_FPR3757  VLFLSLFIFGIISIILGAIGMFKASKNKKMSGILLIIGAVISGNIITFALWLISGIKLLT
                    ****************************************************:*******

    COL             NNKPKDEISDLS
    N315            NNKPKDEISDLS
    NCTC8325        NNKPKDEISDLS
    Newman          NNKPKDEISDLS
    USA300_FPR3757  NNKPKDEISDLS
                    ************