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Summary[edit source | edit]

  • pan ID?: SAUPAN001245000
  • symbol?: geh
  • description?: lipase

      descriptions from strain specific annotations:

    • lipase
    • lipase precursor, interruption-N
    • glycerol ester hydrolase
    • lipase 2
    • truncated triacylglycerol lipase precursor
    • triacylglycerol lipase
    • lipase, glycerol ester hydrolase
    • lipase 2 (Glycerol ester hydrolase 2)
    • lipase 2 precursor
    • Lipase precursor
    • pseudogene
  • strand?: +
  • coordinates?: 1531365..1533310
  • synteny block?: BlockID0007560
  • occurrence?: in 97% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    SA0309 (geh)
    NCTC8325:
    Newman:
    NWMN_0262 (geh)
    USA300_FPR3757:
    04-02981:
    SA2981_0319 (geh)
    08BA02176:
    C248_0309 (geh)
    11819-97:
    MS7_0310 (lip2)
    71193:
    ST398NM01_0333
    ECT-R 2:
    ECTR2_280
    ED133:
    SAOV_0273
    ED98:
    SAAV_0287
    HO 5096 0412:
    SAEMRSA15_02760 (geh)
    JH1:
    SaurJH1_0310
    JH9:
    SaurJH9_0303
    JKD6008:
    SAA6008_00297
    JKD6159:
    SAA6159_00296
    LGA251:
    SARLGA251_02820 (geh)
    M013:
    M013TW_0301
    MRSA252:
    SAR0317 (geh)
    MSHR1132:
    SAMSHR1132_02940
    MSSA476:
    SAS0297
    Mu3:
    SAHV_0317 (geh)
    Mu50:
    SAV0320 (geh)
    MW2:
    MW0297 (geh)
    RF122:
    SAB0257 (geh)
    ST398:
    SAPIG0333
    T0131:
    SAT0131_00325
    TCH60:
    HMPREF0772_10175 (geh)
    TW20:
    USA300_TCH1516:
    USA300HOU_0340 (lip1)
    VC40:
    SAVC_01350 (geh)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTST-NAAAQKETLNQPGEQG
    N315            MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTPTSNAAAQKETLNQPGEQG
    NCTC8325        MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTST-NAAAQKETLNQPGEQG
    Newman          MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTST-NAAAQKETLNQPGEQG
    USA300_FPR3757  MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTST-NAAAQKETLNQPGEQG
                    *****************************************.* ****************

    COL             NAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQSTQNSKTIRTQNDNQVKQDS
    N315            NAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQSTQNSKTIRTQNDNQVKQDS
    NCTC8325        NAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQSTQNSKTIRTQNDNQVKQDS
    Newman          NAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQSTQNSKTIRTQNDNQVKQDS
    USA300_FPR3757  NAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQSTQNSKTIRMQNDNQVKQDS
                    ************************************************* **********

    COL             ERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQSNDVDKSQPSIPAQKVIPN
    N315            ERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQSNDVDKSQPSIPAQKVLPN
    NCTC8325        ERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQSNDVDKSQPSIPAQKVIPN
    Newman          ERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQSNDVDKSQPSIPAQKVIPN
    USA300_FPR3757  ERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQSNDVDKSQPSIPAQKVIPN
                    *********************************************************:**

    COL             HDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTHQPAHQIIDAKQDDTVRQSEQK
    N315            HDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTHQPAHQIIDAKQDDTVRQSEQK
    NCTC8325        HDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTHQPAHQIIDAKQDDTVRQSEQK
    Newman          HDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTHQPAHQIIDAKQDDTVRQSEQK
    USA300_FPR3757  HDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTHQPAHQIIDAKQDDTVRQSEQK
                    ************************************************************

    COL             PQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAPKTRSTTNAAADAKKVRPLKANQV
    N315            PQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAPKTRSTTNAAADAKKVRPLKANQV
    NCTC8325        PQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAPKTRSTTNAAADAKKVRPLKANQV
    Newman          PQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAPKTRSTTNAAADAKKVRPLKANQV
    USA300_FPR3757  PQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAPKTRSTTNAAADAKKVRPLKANQV
                    ************************************************************

    COL             QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNY
    N315            QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNY
    NCTC8325        QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNY
    Newman          QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNY
    USA300_FPR3757  QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNY
                    ************************************************************

    COL             DRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIR
    N315            DRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIR
    NCTC8325        DRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIR
    Newman          DRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIR
    USA300_FPR3757  DRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIR
                    ************************************************************

    COL             LMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASITTLATPHNGSQAADKFGNTEA
    N315            LMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASITTLATPHNGSQAADKFGNTEA
    NCTC8325        LMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASITTLATPHNGSQAADKFGNTEA
    Newman          LMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASITTLATPHNGSQAADKFGNTEA
    USA300_FPR3757  LMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASITTLATPHNGSQAADKFGNTEA
                    ************************************************************

    COL             VRKIMFALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLT
    N315            VRKIMFALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLT
    NCTC8325        VRKIMFALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLT
    Newman          VRKIMFALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLT
    USA300_FPR3757  VRKIMFALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLT
                    ************************************************************

    COL             LDGSAKLNNMTSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMATTSRIIGHDAREEW
    N315            LDGSAKLNNMTSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMDTTSRIIGHDAREEW
    NCTC8325        LDGSAKLNNMTSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMATTSRIIGHDAREEW
    Newman          LDGSAKLNNMTSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMATTSRIIGHDAREEW
    USA300_FPR3757  LDGSAKLNNMTSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMATTSRIIGHDAREEW
                    ********************************************* **************

    COL             RKNDGVVPVISSLHPSNQPFVNVTNDEPATRRGIWQVKPIIQGWD---------------
    N315            RKNDGVVPVISSLHPSNQPFINVTNDEPATRRGIWQVKPIIQGWDHVDFIGVDFLDFKRK
    NCTC8325        RKNDGVVPVISSLHPSNQPFVNVTNDEPATRRGIWQVKPIIQGWDHVDFIGVDFLDFKRK
    Newman          RKNDGVVPVISSLHPSNQPFVNVTNDEPATRRGIWQVKPIIQGWD---------------
    USA300_FPR3757  RKNDGVVPVISSLHPSNQPFVNVTNDEPATRRGIWQVKPIIQGWDHVDFIGVDFLDFKRK
                    ********************:************************               

    COL             -------------------------------
    N315            GAELANFYTGIINDLLRVEATESKGTQLKAS
    NCTC8325        GAELANFYTGIINDLLRVEATESKGTQLKAS
    Newman          -------------------------------
    USA300_FPR3757  GAELANFYTGIINDLLRVEATESKGTQLKAS