Contents
⊟Summary[edit source | edit]
- pan ID?: saupan002181000
- symbol?: —
- description?: NUDIX hydrolase
- NUDIX hydrolase
- NUDIX domain-containing protein
- MutT/nudix family protein
- MutT domain containing protein
- NADH pyrophosphatase
- phosphohydrolase
- MutT/NUDIX family protein, putative
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2685160..2685570
- synteny block?: BlockID0014820
- occurrence?: in 100% of 32 strains
⊟Orthologs[edit source | edit]
04-02981:
SA2981_0442
08BA02176:
C248_0516
11819-97:
MS7_0440
71193:
ST398NM01_0532
ECT-R 2:
ECTR2_400
ED133:
SAOV_0484
ED98:
SAAV_0409
HO 5096 0412:
SAEMRSA15_03920
JH1:
SaurJH1_0501
JH9:
SaurJH9_0488
JKD6008:
SAA6008_00470
JKD6159:
SAA6159_00416
LGA251:
SARLGA251_04000
M013:
M013TW_0431
MRSA252:
SAR0466
MSHR1132:
SAMSHR1132_04110
MSSA476:
SAS0424
Mu3:
SAHV_0464
Mu50:
SAV0467
MW2:
MW0421
RF122:
SAB0416
ST398:
SAPIG0532
T0131:
SAT0131_00507
TCH60:
HMPREF0772_10056
TW20:
SATW20_05350
USA300_TCH1516:
USA300HOU_0467
VC40:
SAVC_01920
⊟Genome Viewer[edit source | edit]
COL chromosome | |
N315 chromosome | |
NCTC8325 chromosome | |
Newman chromosome | |
USA300_FPR3757 chromosome |
⊟Alignments[edit source | edit]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.205)
COL ---MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTM
N315 ---MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTM
NCTC8325 ---MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTM
Newman MSKMIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTM
USA300_FPR3757 ---MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTM
*********************************************************
COL DEIEYVGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITDIRWIDKDNDALIAPA
N315 DEIEYIGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITDIRWIDKDNDALIAPA
NCTC8325 DEIEYVGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITDIRWIDKDNDALIAPA
Newman DEIEYVGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITDIRWIDKDNDALIAPA
USA300_FPR3757 DEIEYVGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITDIRWIDKDNDALIAPA
*****:******************************************************
COL VKVWIETYGGKHDK
N315 VKVWIETYGGKHDK
NCTC8325 VKVWIETYGGKHDK
Newman VKVWIETYGGKHDK
USA300_FPR3757 VKVWIETYGGKHDK
**************