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Summary[edit source | edit]

  • pan ID?: SAUPAN002199000
  • symbol?:
  • description?: transcriptional regulator
  • strand?: +
  • coordinates?: 2704785..2705102
  • synteny block?: BlockID0015000
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0454
    08BA02176:
    C248_0530
    11819-97:
    MS7_0453
    71193:
    ST398NM01_0545
    ECT-R 2:
    ECTR2_414
    ED133:
    SAOV_0497
    ED98:
    SAAV_0423
    HO 5096 0412:
    SAEMRSA15_04050
    JH1:
    SaurJH1_0513
    JH9:
    SaurJH9_0500
    JKD6008:
    SAA6008_00483
    JKD6159:
    SAA6159_00428
    LGA251:
    SARLGA251_04120
    M013:
    M013TW_0444
    MRSA252:
    SAR0478
    MSHR1132:
    SAMSHR1132_04230
    MSSA476:
    SAS0436
    Mu3:
    SAHV_0476
    Mu50:
    SAV0479
    MW2:
    MW0434
    RF122:
    SAB0428
    ST398:
    SAPIG0545
    T0131:
    SAT0131_00520
    TCH60:
    HMPREF0772_10043
    TW20:
    SATW20_05470
    USA300_TCH1516:
    USA300HOU_0478
    VC40:
    SAVC_01980

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAVTVTGHKEVVDVEIKEE
    N315            MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAVTVTGHKEVVDVEIKEE
    NCTC8325        MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAVTVTGHKEVVDVEIKEE
    Newman          MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAVTVTGHKEVVDVEIKEE
    USA300_FPR3757  MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAVTVTGHKEVVDVEIKEE
                    ************************************************************

    COL             AVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNIPGM
    N315            AVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNIPGM
    NCTC8325        AVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNIPGM
    Newman          AVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNIPGM
    USA300_FPR3757  AVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNIPGM
                    *********************************************