From AureoWiki
Jump to: navigation, search

Summary[edit source | edit]

  • pan ID?: SAUPAN002257000
  • symbol?: folB
  • description?: dihydroneopterin aldolase
  • strand?: +
  • coordinates?: 2765075..2765446
  • synteny block?: BlockID0015560
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0559 (folB)
    N315:
    SA0473 (folB)
    NCTC8325:
    Newman:
    NWMN_0477 (folB)
    USA300_FPR3757:
    04-02981:
    SA2981_0490 (folB)
    08BA02176:
    C248_0571 (folB)
    11819-97:
    MS7_0492 (folB)
    71193:
    ST398NM01_0581
    ECT-R 2:
    ECTR2_455 (folB)
    ED133:
    SAOV_0537 (folB)
    ED98:
    SAAV_0462 (folB)
    HO 5096 0412:
    SAEMRSA15_04410 (folB)
    JH1:
    SaurJH1_0550
    JH9:
    SaurJH9_0537
    JKD6008:
    SAA6008_00520 (folB)
    JKD6159:
    SAA6159_00466 (folB)
    LGA251:
    SARLGA251_04490 (folB)
    M013:
    M013TW_0487
    MRSA252:
    SAR0516 (folB)
    MSHR1132:
    SAMSHR1132_04590
    MSSA476:
    SAS0472
    Mu3:
    SAHV_0512 (folB)
    Mu50:
    SAV0515 (folB)
    MW2:
    MW0470 (folB)
    RF122:
    SAB0464 (folB)
    ST398:
    SAPIG0581 (folB)
    T0131:
    SAT0131_00562
    TCH60:
    HMPREF0772_10003 (folB)
    TW20:
    SATW20_05830 (folB)
    USA300_TCH1516:
    USA300HOU_0509 (folB)
    VC40:
    SAVC_02160

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGRTDNVIDTVHYGEVFEE
    N315            MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGRTDNVIDTVHYGEVFEE
    NCTC8325        MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGRTDNVIDTVHYGEVFEE
    Newman          MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGRTDNVIDTVHYGEVFEE
    USA300_FPR3757  MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGRTDNVIDTVHYGEVFEE
                    ************************************************************

    COL             VKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVREN
    N315            VKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVREN
    NCTC8325        VKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVREN
    Newman          VKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVREN
    USA300_FPR3757  VKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVREN
                    ************************************************************

    COL             K
    N315            K
    NCTC8325        K
    Newman          K
    USA300_FPR3757  K
                    *