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Summary[edit source | edit]

  • pan ID?: SAUPAN002294000
  • symbol?: gltX
  • description?: glutamyl-tRNA synthetase

      descriptions from strain specific annotations:

    • glutamyl-tRNA synthetase
    • Glutamyl-tRNA(Gln) synthetase
    • putative glutamyl-tRNA synthetase
    • glutamate--tRNA ligase
  • strand?: +
  • coordinates?: 2816687..2818150
  • synteny block?: BlockID0015930
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0574 (gltX)
    N315:
    SA0486 (gltX)
    NCTC8325:
    Newman:
    NWMN_0490 (gltX)
    USA300_FPR3757:
    04-02981:
    SA2981_0503 (gltX)
    08BA02176:
    C248_0600 (gltX)
    11819-97:
    MS7_0517 (gltX)
    71193:
    ST398NM01_0603
    ECT-R 2:
    ECTR2_481 (gltX)
    ED133:
    SAOV_0563 (gltS)
    ED98:
    SAAV_0489 (gltX)
    HO 5096 0412:
    SAEMRSA15_04540 (gltX)
    JH1:
    SaurJH1_0564 (gltX)
    JH9:
    SaurJH9_0550 (gltX)
    JKD6008:
    SAA6008_00534 (gltX)
    JKD6159:
    SAA6159_00481 (gltX)
    LGA251:
    SARLGA251_04630 (gltX)
    M013:
    M013TW_0512
    MRSA252:
    SAR0531 (gltX)
    MSHR1132:
    SAMSHR1132_04720
    MSSA476:
    SAS0485 (gltX)
    Mu3:
    SAHV_0525 (gltX)
    Mu50:
    SAV0528 (gltX)
    MW2:
    MW0483 (gltX)
    RF122:
    SAB0478 (gltX)
    ST398:
    SAPIG0603 (gltX)
    T0131:
    SAT0131_00580 (splB)
    TCH60:
    HMPREF0772_12663 (gltX)
    TW20:
    SATW20_05970 (gltX)
    USA300_TCH1516:
    USA300HOU_0521 (gltX)
    VC40:
    SAVC_02225 (gltX)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MSDRIRVRYAPSPTGYLHIGNARTALFNYLYAKHYNGDFVIRIEDTDKKRNLEDGETSQF
    N315            MSDRIRVRYAPSPTGYLHIGNARTALFNYLYAKHYNGDFVIRIEDTDKKRNLEDGETSQF
    NCTC8325        MSDRIRVRYAPSPTGYLHIGNARTALFNYLYAKHYNGDFVIRIEDTDKKRNLEDGETSQF
    Newman          MSDRIRVRYAPSPTGYLHIGNARTALFNYLYAKHYNGDFVIRIEDTDKKRNLEDGETSQF
    USA300_FPR3757  MSDRIRVRYAPSPTGYLHIGNARTALFNYLYAKHYNGDFVIRIEDTDKKRNLEDGETSQF
                    ************************************************************

    COL             DNLKWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAYKCYMTEEELEAERE
    N315            DNLKWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAYKCYMTEEELEAERE
    NCTC8325        DNLKWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAYKCYMTEEELEAERE
    Newman          DNLKWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAYKCYMTEEELEAERE
    USA300_FPR3757  DNLKWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAEDKAYKCYMTEEELEAERE
                    ************************************************************

    COL             AQIARGEMPRYGGQHAHLTEEQRQQFEAEGRQPSIRFRVPQNQTYSFDDMVKGNISFDSN
    N315            AQIARGEMPRYGGQHAHLTEEQRQQFEAEGRQPSIRFRVPQNQTYSFDDMVKGNISFDSN
    NCTC8325        AQIARGEMPRYGGQHAHLTEEQRQQFEAEGRQPSIRFRVPQNQTYSFDDMVKGNISFDSN
    Newman          AQIARGEMPRYGGQHAHLTEEQRQQFEAEGRQPSIRFRVPQNQTYSFDDMVKGNISFDSN
    USA300_FPR3757  AQIARGEMPRYGGQHAHLTEEQRQQFEAEGRQPSIRFRVPQNQTYSFDDMVKGNISFDSN
                    ************************************************************

    COL             GIGDWVIVKKDGIPTYNFAVAIDDHYMQISDVIRGDDHISNTPKQIMIYEAFGWEPPRFG
    N315            GIGDWVIVKKDGIPTYNFAVAIDDHYMQISDVIRGDDHISNTPKQIMIYEAFGWEPPRFG
    NCTC8325        GIGDWVIVKKDGIPTYNFAVAIDDHYMQISDVIRGDDHISNTPKQIMIYEAFGWEPPRFG
    Newman          GIGDWVIVKKDGIPTYNFAVAIDDHYMQISDVIRGDDHISNTPKQIMIYEAFGWEPPRFG
    USA300_FPR3757  GIGDWVIVKKDGIPTYNFAVAIDDHYMQISDVIRGDDHISNTPKQIMIYEAFGWEPPRFG
                    ************************************************************

    COL             HMSLIVNEERKKLSKRDGQILQFIEQYRDLGYLPEALFNFIALLGWSPEGEEEIFSKEEF
    N315            HMSLIVNEERKKLSKRDGQILQFIEQYRDLGYLPEALFNFIALLGWSPEGEEEIFSKEEF
    NCTC8325        HMSLIVNEERKKLSKRDGQILQFIEQYRDLGYLPEALFNFIALLGWSPEGEEEIFSKEEF
    Newman          HMSLIVNEERKKLSKRDGQILQFIEQYRDLGYLPEALFNFIALLGWSPEGEEEIFSKEEF
    USA300_FPR3757  HMSLIVNEERKKLSKRDGQILQFIEQYRDLGYLPEALFNFIALLGWSPEGEEEIFSKEEF
                    ************************************************************

    COL             IKIFDEKRLSKSPAFFDKQKLAWVNNQYMKQKDTETVFQLALPHLIKANLIPEVPSEEDL
    N315            IKIFDEKRLSKSPAFFDKQKLAWVNNQYMKQKDTETVFQLALPHLIKANLIPEVPSEEDL
    NCTC8325        IKIFDEKRLSKSPAFFDKQKLAWVNNQYMKQKDTETVFQLALPHLIKANLIPEVPSEEDL
    Newman          IKIFDEKRLSKSPAFFDKQKLAWVNNQYMKQKDTETVFQLALPHLIKANLIPEVPSEEDL
    USA300_FPR3757  IKIFDEKRLSKSPAFFDKQKLAWVNNQYMKQKDTETVFQLALPHLIKANLIPEVPSEEDL
                    ************************************************************

    COL             SWGRKLIALYQKEMSYAGEIVPLSEMFFKEMPALGEEEQQVINGKQVPELMTHLFSKLEA
    N315            SWGRKLIALYQKEMSYAGEIVPLSEMFFKEMPALGEEEQQVINGEQVPELMTHLFSKLEA
    NCTC8325        SWGRKLIALYQKEMSYAGEIVPLSEMFFKEMPALGEEEQQVINGEQVPELMTHLFSKLEA
    Newman          SWGRKLIALYQKEMSYAGEIVPLSEMFFKEMPALGEEEQQVINGEQVPELMTHLFSKLEA
    USA300_FPR3757  SWGRKLIALYQKEMSYAGEIVPLSEMFFKEMPALGEEEQQVINGEQVPELMTHLFSKLEA
                    ********************************************:***************

    COL             LEPFESAEIKKTIKEVQKETGIKGKQLFMPIRVAVTGQMHGPELPNTIEVLGKEKVLNRL
    N315            LEPFEAAEIKKTIKEVQKETGIKGKQLFMPIRVAVTGQMHGPELPNTIEVLGKEKVLNRL
    NCTC8325        LEPFEAAEIKKTIKEVQKETGIKGKQLFMPIRVAVTGQMHGPELPNTIEVLGKEKVLNRL
    Newman          LEPFESAEIKKTIKEVQKETGIKGKQLFMPIRVAVTGQMHGPELPNTIEVLGKEKVLNRL
    USA300_FPR3757  LEPFEAAEIKKTIKEVQKETGIKGKQLFMPIRVAVTGQMHGPELPNTIEVLGKEKVLNRL
                    *****:******************************************************

    COL             KQYK
    N315            KQYK
    NCTC8325        KQYK
    Newman          KQYK
    USA300_FPR3757  KQYK
                    ****