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Summary[edit source | edit]

  • pan ID?: SAUPAN002343000
  • symbol?: folE2
  • description?: GTP cyclohydrolase

      descriptions from strain specific annotations:

    • GTP cyclohydrolase
    • putative GTP cyclohydrolase
    • GTP cyclohydrolase I type 2
    • GTP cyclohydrolase folE2
  • strand?: -
  • coordinates?: 2883677..2884555
  • synteny block?: BlockID0016420
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0543
    08BA02176:
    C248_0641
    11819-97:
    MS7_0556 (folE2)
    71193:
    ST398NM01_0641
    ECT-R 2:
    ECTR2_520
    ED133:
    SAOV_0601c
    ED98:
    SAAV_0529
    HO 5096 0412:
    SAEMRSA15_04930
    JH1:
    SaurJH1_0603
    JH9:
    SaurJH9_0589
    JKD6008:
    SAA6008_00574
    JKD6159:
    SAA6159_00520
    LGA251:
    SARLGA251_05020
    M013:
    M013TW_0554
    MRSA252:
    SAR0570
    MSHR1132:
    SAMSHR1132_05100
    MSSA476:
    SAS0524
    Mu3:
    SAHV_0564
    Mu50:
    SAV0566
    MW2:
    MW0521
    RF122:
    SAB0516c
    ST398:
    SAPIG0641
    T0131:
    SAT0131_00627
    TCH60:
    HMPREF0772_12622
    TW20:
    SATW20_06360
    USA300_TCH1516:
    USA300HOU_0560
    VC40:
    SAVC_02420

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTEFDLSTREGRWKHFGSVDPIEGTKPTTKNEMTDLQSTHKDFLFEIEEVGIKNLVYPVL
    N315            MTEFDLSTREGRWKHFGSVDPIEGTKPTTKNEMTDLQSTHKDFLFEIEEVGIKNLVYPVL
    NCTC8325        MTEFDLSTREGRWKHFGSVDPIEGTKPTTKNEMTDLQSTHKDFLFEIEEVGIKNLVYPVL
    Newman          MTEFDLSTREGRWKHFGSVDPIEGTKPTTKNEMTDLQSTHKDFLFEIEEVGIKNLVYPVL
    USA300_FPR3757  MTEFDLSTREGRWKHFGSVDPIEGTKPTTKNEMTDLQSTHKDFLFEIEEVGIKNLVYPVL
                    ************************************************************

    COL             VDQYQTAGTFSFSTSLTKDEKGINMSRIIESVEKHYDNGIELEFNTLYQVLRTLQTNMKQ
    N315            VDQYQTAGTFSFSTSLTKDEKGINMSRIIESVEKHYDNGIELEFNTLYQVLRTLQTNMKQ
    NCTC8325        VDQYQTAGTFSFSTSLTKDEKGINMSRIIESVEKHYDNGIELEFNTLYQVLRTLQTNMKQ
    Newman          VDQYQTAGTFSFSTSLTKDEKGINMSRIIESVEKHYDNGIELEFNTLYQVLRTLQTNMKQ
    USA300_FPR3757  VDQYQTAGTFSFSTSLTKDEKGINMSRIIESVEKHYDNGIELEFNTLYQVLRTLQTNMKQ
                    ************************************************************

    COL             NAAGVDVSGKWFFDRYSPTTNIKAVGNADVTYGLAIDGDKVTRKELTIEATVTTLCPCSK
    N315            NAAGVDVSGKWFFDRYSPTTNIKAVGNADVTYGLAIDGDKVTRKELTIEATVTTLCPCSK
    NCTC8325        NAAGVDVSGKWFFDRYSPTTNIKAVGNADVTYGLAIDGDKVTRKELTIEATVTTLCPCSK
    Newman          NAAGVDVSGKWFFDRYSPTTNIKAVGNADVTYGLAIDGDKVTRKELTIEATVTTLCPCSK
    USA300_FPR3757  NAAGVDVSGKWFFDRYSPTTNIKAVGNADVTYGLAIDGDKVTRKELTIEATVTTLCPCSK
                    ************************************************************

    COL             EISEYSAHNQRGVVTVKTYINKDQDIVDDYKNKILDAMEANASSILYPILKRPDEKRVTE
    N315            EISEYSAHNQRGVVTVKTYINKDQNIVDDYKNKILDAMEANASSILYPILKRPDEKRVTE
    NCTC8325        EISEYSAHNQRGVVTVKTYINKDQDIVDDYKNKILDAMEANASSILYPILKRPDEKRVTE
    Newman          EISEYSAHNQRGVVTVKTYINKDQDIVDDYKNKILDAMEANASSILYPILKRPDEKRVTE
    USA300_FPR3757  EISEYSAHNQRGVVTVKTYINKDQDIVDDYKNKILDAMEANASSILYPILKRPDEKRVTE
                    ************************:***********************************

    COL             RAYENPRFVEDLIRLIAADLVEFDWLDGFDIECRNEESIHQHDAFAKLKYRK
    N315            RAYENPRFVEDLIRLIAADLVEFDWLDGFDIECRNEESIHQHDAFAKLKYRK
    NCTC8325        RAYENPRFVEDLIRLIAADLVEFDWLDGFDIECRNEESIHQHDAFAKLKYRK
    Newman          RAYENPRFVEDLIRLIAADLVEFDWLDGFDIECRNEESIHQHDAFAKLKYRK
    USA300_FPR3757  RAYENPRFVEDLIRLIAADLVEFDWLDGFDIECRNEESIHQHDAFAKLKYRK
                    ****************************************************