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Summary[edit source | edit]

  • pan ID?: SAUPAN002359000
  • symbol?: ung
  • description?: uracil-DNA glycosylase

      descriptions from strain specific annotations:

    • uracil-DNA glycosylase
    • putative uracil-DNA glycosylase
  • strand?: +
  • coordinates?: 2898829..2899485
  • synteny block?: BlockID0016580
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0627 (ung)
    N315:
    SA0538 (ung)
    NCTC8325:
    Newman:
    NWMN_0544 (ung)
    USA300_FPR3757:
    04-02981:
    SA2981_0558 (ung)
    08BA02176:
    C248_0656 (ung)
    11819-97:
    MS7_0570 (ung)
    71193:
    ST398NM01_0655
    ECT-R 2:
    ECTR2_534 (ung)
    ED133:
    SAOV_0615
    ED98:
    SAAV_0543 (ung)
    HO 5096 0412:
    SAEMRSA15_05080 (ung)
    JH1:
    SaurJH1_0618
    JH9:
    SaurJH9_0604
    JKD6008:
    SAA6008_00588 (ung)
    JKD6159:
    SAA6159_00534 (ung)
    LGA251:
    SARLGA251_05160 (ung)
    M013:
    M013TW_0568
    MRSA252:
    SAR0586 (ung)
    MSHR1132:
    SAMSHR1132_05250
    MSSA476:
    SAS0539
    Mu3:
    SAHV_0579 (ung)
    Mu50:
    SAV0581 (ung)
    MW2:
    MW0536 (ung)
    RF122:
    SAB0531 (ung)
    ST398:
    SAPIG0655 (ung)
    T0131:
    SAT0131_00642
    TCH60:
    HMPREF0772_12608 (ung)
    TW20:
    SATW20_06500 (ung)
    USA300_TCH1516:
    USA300HOU_0574 (ung)
    VC40:
    SAVC_02490

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDP
    N315            MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDP
    NCTC8325        MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDP
    Newman          MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDP
    USA300_FPR3757  MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDP
                    ************************************************************

    COL             YHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLT
    N315            YHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLT
    NCTC8325        YHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLT
    Newman          YHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLT
    USA300_FPR3757  YHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLT
                    ************************************************************

    COL             VRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVH
    N315            VRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVH
    NCTC8325        VRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVH
    Newman          VRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVH
    USA300_FPR3757  VRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVH
                    ************************************************************

    COL             PSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
    N315            PSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
    NCTC8325        PSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
    Newman          PSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
    USA300_FPR3757  PSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
                    **************************************