PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002497000
• symbol^?: mnhD2
• synonym:
• description^?: cation:proton antiporter

  descriptions from strain specific annotations:

  • cation:proton antiporter
  • monovalent cation/H+ antiporter subunit D
  • putative monovalent cation/H+ antiporter subunit D
  • monovalent cation/H antiporter, subunit D, putative
  • Na+/H+ antiporter subunit D
  • putative NADH-Ubiquinone/plastoquinone (complexI) oxidoreductase protein
  • CPA3 family monovalent cation (K+ or Na+):proton (H+) antiporter-3, MnhD subunit
  • monovalent cation antiporter-3, MnhD_1
  • MrpD
  • Na(+) H(+) antiporter subunit D
  • NADH-Ubiquinone/plastoquinone (complex I), various chains family protein
  • NADH Ubiquinone plastoquinone complex I oxidoreductase protein
  • Putative antiporter subunit mnhD2
• strand^?: +
• coordinates^?: 3009198..3010697
• synteny block^?: BlockID0017330
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0682
N315:
SA0581
NCTC8325:
SAOUHSC_00628
Newman:
NWMN_0596 (mnhD)
USA300_FPR3757:
SAUSA300_0613
04-02981:
SA2981_0601
08BA02176:
C248_0708 (mnhD1)
11819-97:
MS7_0677
6850:
RSAU_000581 (mnhD1)
71193:
ST398NM01_0705
ECT-R 2:
ECTR2_577
ED133:
SAOV_0661
ED98:
SAAV_0589
HO 5096 0412:
SAEMRSA15_05520
JH1:
SaurJH1_0663
JH9:
SaurJH9_0648
JKD6008:
SAA6008_00643 (mnhD_1)
JKD6159:
SAA6159_00581 (mnhD_1)
LGA251:
SARLGA251_05600
M013:
M013TW_0614
MRSA252:
SAR0633
MSHR1132:
SAMSHR1132_05690
MSSA476:
SAS0592
Mu3:
SAHV_0622
Mu50:
SAV0625
MW2:
MW0588
RF122:
SAB0576
ST398:
SAPIG0705
T0131:
SAT0131_00693
TCH60:
HMPREF0772_12563 (mnhD2)
TW20:
SATW20_07010
USA300_TCH1516:
USA300HOU_0646 (mnhD1)
VC40:
SAVC_02765

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MLSNLLILPMLLPFLCALILVFLKNNDRISKYLYLGTMTITTIISLMLLIYVQRHRPITL
  N315            MLSNLLILPMLLPFLCALILVFLKNNDRISKYLYLGTMTITTIISLMLLIYVQRHRPITL
  NCTC8325        MLSNLLILPMLLPFLCALILVFLKNNDRISKYLYLGTMTITTIISLMLLIYVQRHRPITL
  Newman          MLSNLLILPMLLPFLCALILVFLKNNDRISKYLYLGTMTITTIISLMLLIYVQRHRPITL
  USA300_FPR3757  MLSNLLILPMLLPFLCALILVFLKNNDRISKYLYLGTMTITTIISLMLLIYVQRHRPITL
                  ************************************************************
  
  COL             DFGGWSAPFGIQFLGDSLSLIMVTTASFVITLIMAYGFGRGEHKANRYHLPSFILFLSVG
  N315            DFGGWSAPFGIQFLGDSLSLIMVTTASFVITLIMAYGFGRGEHKANRYHLPSFILFLSVG
  NCTC8325        DFGGWSAPFGIQFLGDSLSLIMVTTASFVITLIMAYGFGRGEHKANRYHLPSFILFLSVG
  Newman          DFGGWSAPFGIQFLGDSLSLIMVTTASFVITLIMAYGFGRGEHKANRYHLPSFILFLSVG
  USA300_FPR3757  DFGGWSAPFGIQFLGDSLSLIMVTTASFVITLIMAYGFGRGEHKANRYHLPSFILFLSVG
                  ************************************************************
  
  COL             VIGSFLTSDLFNLYVMFEIMLLASFVLITLGQSVEQLRAAIIYVVLNIIGSWLFLLGIGL
  N315            VIGSFLTSDLFNLYVMFEIMLLASFVLITLGQSVEQLRAAIIYVVLNIIGSWLFLLGIGL
  NCTC8325        VIGSFLTSDLFNLYVMFEIMLLASFVLITLGQSVEQLRAAIIYVVLNIIGSWLFLLGIGL
  Newman          VIGSFLTSDLFNLYVMFEIMLLASFVLITLGQSVEQLRAAIIYVVLNIIGSWLFLLGIGL
  USA300_FPR3757  VIGSFLTSDLFNLYVMFEIMLLASFVLITLGQSVEQLRAAIIYVVLNIIGSWLFLLGIGL
                  ************************************************************
  
  COL             LYKTVGTLNFSHIAMRLNDMGDNRTVTMISLIFLVAFSAKAALVLFMWLPKAYAVLNTEL
  N315            LYKTVGTLNFSHIAMRLNDMGDNRTVTMISLIFLVAFSAKAALVLFMWLPKAYAVLNTEL
  NCTC8325        LYKTVGTLNFSHIAMRLNDMGDNRTVTMISLIFLVAFSAKAALVLFMWLPKAYAVLNTEL
  Newman          LYKTVGTLNFSHIAMRLNDMGDNRTVTMISLIFLVAFSAKAALVLFMWLPKAYAVLNTEL
  USA300_FPR3757  LYKTVGTLNFSHIAMRLNDMGDNRTVTMISLIFLVAFSAKAALVLFMWLPKAYAVLNTEL
                  ************************************************************
  
  COL             AALFAALMTKVGAYALIRFFTLLFDQHNDLIHPLLATMAAITMVIGAIGVIAYKDIKKIA
  N315            AALFAALMTKVGAYALIRFFTLLFDQHNDLIHPLLATMAAITMVIGAIGVIAYKDIKKIA
  NCTC8325        AALFAALMTKVGAYALIRFFTLLFDQHNDLIHPLLATMAAITMVIGAIGVIAYKDIKKIA
  Newman          AALFAALMTKVGAYALIRFFTLLFDQHNDLIHPLLATMAAITMVIGAIGVIAYKDIKKIA
  USA300_FPR3757  AALFAALMTKVGAYALIRFFTLLFDQHNDLIHPLLATMAAITMVIGAIGVIAYKDIKKIA
                  ************************************************************
  
  COL             AYQVIISIGFIILGLGTNTFAGINGAIFYLVNDIVVKTLLFFIIGSLVYITGYRQYQYLN
  N315            AYQVIISIGFIILGLGTNTFAGINGAIFYLVNDIVVKTLLFFIIGSLVYITGYRQYQYLN
  NCTC8325        AYQVIISIGFIILGLGTNTFAGINGAIFYLVNDIVVKTLLFFIIGSLVYITGYRQYQYLN
  Newman          AYQVIISIGFIILGLGTNTFAGINGAIFYLVNDIVVKTLLFFIIGSLVYITGYRQYQYLN
  USA300_FPR3757  AYQVIISIGFIILGLGTNTFAGINGAIFYLVNDIVVKTLLFFIIGSLVYITGYRQYQYLN
                  ************************************************************
  
  COL             GLAKKEPLFGVAFIIMIFAIGGVPPFSGFPGKVLIFQGALQNGNYIGLALMIITSLIAMY
  N315            GLAKKEPLFGVAFIIMIFAIGGVPPFSGFPGKVLIFQGALQNGNYIGLALMIITSLIAMY
  NCTC8325        GLAKKEPLFGVAFIIMIFAIGGVPPFSGFPGKVLIFQGALQNGNYIGLALMIITSLIAMY
  Newman          GLAKKEPLFGVAFIIMIFAIGGVPPFSGFPGKVLIFQGALQNGNYIGLALMIITSLIAMY
  USA300_FPR3757  GLAKKEPLFGVAFIIMIFAIGGVPPFSGFPGKVLIFQGALQNGNYIGLALMIITSLIAMY
                  ************************************************************
  
  COL             SLFRILFYMYFGDKDGEEVNFKKIPLYRKRILSILVVVVIAIGIAAPVVLNVTSDATELN
  N315            SLFRIFFYMYFGDKDGEEVNFKKIPLYRKRILSILVVVVIAIGIAAPVVLNVTSDATELN
  NCTC8325        SLFRILFYMYFGDKDGEEVNFKKIPLYRKRILSILVVVVIAIGIAAPVVLNVTSDATELN
  Newman          SLFRILFYMYFGDKDGEEVNFKKIPLYRKRILSILVVVVIAIGIAAPVVLNVTSDATELN
  USA300_FPR3757  SLFRILFYMYFGDKDGEEVNFKKIPLYRKRILSILVVVVIAIGIAAPVVLNVTSDATELN
                  *****:******************************************************
  
  COL             TSDQLYQKLVNPHLKGED
  N315            TSDQLYQKLVNPHLKGED
  NCTC8325        TSDQLYQKLVNPHLKGED
  Newman          TSDQLYQKLVNPHLKGED
  USA300_FPR3757  TSDQLYQKLVNPHLKGED
                  ******************