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Summary[edit source | edit]

  • pan ID?: SAUPAN002518000
  • symbol?: tagD
  • description?: glycerol-3-phosphate cytidylyltransferase
  • strand?: +
  • coordinates?: 3030164..3030562
  • synteny block?: BlockID0017540
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0698 (tagD)
    N315:
    SA0597 (tagD)
    NCTC8325:
    Newman:
    NWMN_0611 (tagD)
    USA300_FPR3757:
    04-02981:
    SA2981_0617
    08BA02176:
    C248_0723 (tagD)
    11819-97:
    MS7_0692 (tagD)
    71193:
    ST398NM01_0720
    ECT-R 2:
    ECTR2_593 (tagD)
    ED133:
    SAOV_0676 (tagD)
    ED98:
    SAAV_0604 (tagD)
    HO 5096 0412:
    SAEMRSA15_05670 (tagD)
    JH1:
    SaurJH1_0679
    JH9:
    SaurJH9_0664
    JKD6008:
    SAA6008_00658 (tagD)
    JKD6159:
    SAA6159_00596 (tagD)
    LGA251:
    SARLGA251_05750 (tagD)
    M013:
    M013TW_0629
    MRSA252:
    SAR0651 (tagD)
    MSHR1132:
    SAMSHR1132_05870
    MSSA476:
    SAS0607
    Mu3:
    SAHV_0638 (tagD)
    Mu50:
    SAV0641 (tagD)
    MW2:
    MW0603 (tagD)
    RF122:
    SAB0591 (tagD)
    ST398:
    SAPIG0720 (tagD)
    T0131:
    SAT0131_00710 (pcrA)
    TCH60:
    HMPREF0772_12546 (tagD)
    TW20:
    SATW20_07160 (tagD)
    USA300_TCH1516:
    USA300HOU_0661 (tagD)
    VC40:
    SAVC_02840

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLE
    N315            MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLE
    NCTC8325        MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLE
    Newman          MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLE
    USA300_FPR3757  MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLE
                    ************************************************************

    COL             SIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFLKDKCEVIYLKRTEGISTT
    N315            SIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFLKDKCEVIYLKRTEGISTT
    NCTC8325        SIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFLKDKCEVIYLKRTEGISTT
    Newman          SIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFLKDKCEVIYLKRTEGISTT
    USA300_FPR3757  SIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFLKDKCEVIYLKRTEGISTT
                    ************************************************************

    COL             KIKQELYGKDAK
    N315            KIKQELYGKDAK
    NCTC8325        KIKQELYGKDAK
    Newman          KIKQELYGKDAK
    USA300_FPR3757  KIKQELYGKDAK
                    ************