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Summary[edit source | edit]

  • pan ID?: SAUPAN002651000
  • symbol?:
  • description?: Integral membrane protein

      descriptions from strain specific annotations:

    • Integral membrane protein
    • Threonine/Serine Exporter
  • strand?: -
  • coordinates?: 3149523..3150017
  • synteny block?: BlockID0018860
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0722
    08BA02176:
    C248_0831
    11819-97:
    MS7_0794
    71193:
    ST398NM01_0820
    ECT-R 2:
    ECTR2_694
    ED133:
    SAOV_0781c
    ED98:
    SAAV_0706
    HO 5096 0412:
    SAEMRSA15_06700
    JH1:
    SaurJH1_0785
    JH9:
    SaurJH9_0768
    JKD6008:
    SAA6008_00759
    JKD6159:
    SAA6159_00699
    LGA251:
    SARLGA251_06770
    M013:
    M013TW_0731
    MRSA252:
    SAR0798
    MSHR1132:
    SAMSHR1132_06890
    MSSA476:
    SAS0709
    Mu3:
    SAHV_0741
    Mu50:
    SAV0744
    MW2:
    MW0706
    RF122:
    SAB0696c
    ST398:
    SAPIG0820
    T0131:
    SAT0131_00816 (ispD)
    TCH60:
    HMPREF0772_12439
    TW20:
    SATW20_08190
    USA300_TCH1516:
    USA300HOU_0771
    VC40:
    SAVC_03355

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MLFYLFHFTISFISTVLFSIIFNAPKRLLVACGFVGAIAWTIYQLTVDLEFGKVGASFLG
    N315            MLFYLFHFTISFISTVLFSIIFNAPKRLLVACGFVGAIAWTIYQLTVDLEFGKVGASFLG
    NCTC8325        MLFYLFHFTISFISTVLFSIIFNAPKRLLVACGFVGAIAWTIYQLTVDLEFGKVGASFLG
    Newman          MLFYLFHFTISFISTVLFSIIFNAPKRLLVACGFVGAIAWTIYQLTVDLEFGKVGASFLG
    USA300_FPR3757  MLFYLFHFTISFISTVLFSIIFNAPKRLLVACGFVGAIAWTIYQLTVDLEFGKVGASFLG
                    ************************************************************

    COL             SLILGLMSHTMSRRYKRPVIIFIVPGIIPLVPGGAAYQATRFLVSNDYTSAVNTFLEVTL
    N315            SLILGLMSHTMSRRYKRPVIIFIVPGIIPLVPGGAAYQATRFLVSNDYTSAVNTFLEVTL
    NCTC8325        SLILGLMSHTMSRRYKRPVIIFIVPGIIPLVPGGAAYQATRFLVSNDYTSAVNTFLEVTL
    Newman          SLILGLMSHTMSRRYKRPVIIFIVPGIIPLVPGGAAYQATRFLVSNDYTSAVNTFLEVTL
    USA300_FPR3757  SLILGLMSHTMSRRYKRPVIIFIVPGIIPLVPGGAAYQATRFLVSNDYTSAVNTFLEVTL
                    ************************************************************

    COL             ISGAIAFGILVSEILYYLYTRIKQLYGKIKGKTYKKSYNMNNRV
    N315            ISGAIAFGILVSEILYYLYTRIKQLYGKIKGKTYKKSYNMNNRV
    NCTC8325        ISGAIAFGILVSEILYYLYTRIKQLYGKIKGKTYKKSYNMNNRV
    Newman          ISGAIAFGILVSEILYYLYTRIKQLYGKIKGKTYKKSYNMNNRV
    USA300_FPR3757  ISGAIAFGILVSEILYYLYTRIKQLYGKIKGKTYKKSYNMNNRV
                    ********************************************