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Summary[edit source | edit]

  • pan ID?: SAUPAN002684000
  • symbol?: trxB
  • description?: thioredoxine reductase

      descriptions from strain specific annotations:

    • thioredoxine reductase
    • thioredoxin reductase
    • thioredoxin-disulfide reductase
    • putative thioredoxin reductase
  • strand?: +
  • coordinates?: 3181571..3182506
  • synteny block?: BlockID0019160
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0829 (trxB)
    N315:
    SA0719 (trxB)
    NCTC8325:
    Newman:
    NWMN_0732 (trxB)
    USA300_FPR3757:
    04-02981:
    SA2981_0742 (trxB)
    08BA02176:
    C248_0851 (trxB)
    11819-97:
    MS7_0814 (trxB)
    71193:
    ST398NM01_0840
    ECT-R 2:
    ECTR2_714 (trxB)
    ED133:
    SAOV_0801
    ED98:
    SAAV_0727 (trxB)
    HO 5096 0412:
    SAEMRSA15_06900 (trxB)
    JH1:
    SaurJH1_0805
    JH9:
    SaurJH9_0788
    JKD6008:
    SAA6008_00779 (trxB)
    JKD6159:
    SAA6159_00721 (trxB)
    LGA251:
    SARLGA251_06970 (trxB)
    M013:
    M013TW_0751
    MRSA252:
    SAR0818 (trxB)
    MSHR1132:
    SAMSHR1132_07090
    MSSA476:
    SAS0729
    Mu3:
    SAHV_0761 (trxB)
    Mu50:
    SAV0764 (trxB)
    MW2:
    MW0726 (trxB)
    RF122:
    SAB0717 (trxB)
    ST398:
    SAPIG0840 (trxB)
    T0131:
    SAT0131_00836
    TCH60:
    HMPREF0772_12417 (trxB2)
    TW20:
    SATW20_08390 (trxB)
    USA300_TCH1516:
    USA300HOU_0792 (trxB1)
    VC40:
    SAVC_03460

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITG
    N315            MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITG
    NCTC8325        MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITG
    Newman          MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITG
    USA300_FPR3757  MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITG
                    ************************************************************

    COL             PDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGV
    N315            PDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGV
    NCTC8325        PDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGV
    Newman          PDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGV
    USA300_FPR3757  PDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGV
                    ************************************************************

    COL             PGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR
    N315            PGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR
    NCTC8325        PGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR
    Newman          PGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR
    USA300_FPR3757  PGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR
                    ************************************************************

    COL             AQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGM
    N315            AQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGM
    NCTC8325        AQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGM
    Newman          AQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGM
    USA300_FPR3757  AQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGM
                    ************************************************************

    COL             KPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSA
    N315            KPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSA
    NCTC8325        KPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSA
    Newman          KPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSA
    USA300_FPR3757  KPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSA
                    ************************************************************

    COL             AEYIEHLNDQA
    N315            AEYIEHLNDQA
    NCTC8325        AEYIEHLNDQA
    Newman          AEYIEHLNDQA
    USA300_FPR3757  AEYIEHLNDQA
                    ***********