Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003015000
- symbol?: mpfB
- synonym:
- description?: HlyC/CorC family transporter
- HlyC/CorC family transporter
- DUF21 domain-containing protein
- ion transport modulator, putative
- CBS domain-containing protein
- CBS domain protein
- CorC
- Hemolysin-like protein containing CBS domains
- putative Mg2+ and Co2+ transporter, CorB
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3408857..3409897
- synteny block?: BlockID0021230
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0874
08BA02176:
C248_0918
11819-97:
MS7_0875
6850:
RSAU_000798
71193:
ST398NM01_0903
ECT-R 2:
ECTR2_775
ED133:
SAOV_0866
ED98:
SAAV_0880
HO 5096 0412:
SAEMRSA15_07500
JH1:
SaurJH1_0936
JH9:
SaurJH9_0918
JKD6008:
SAA6008_00871
JKD6159:
SAA6159_00779
LGA251:
SARLGA251_08380
M013:
—
MRSA252:
SAR0882
MSHR1132:
SAMSHR1132_07720
MSSA476:
SAS0790
Mu3:
SAHV_0914
Mu50:
SAV0919
MW2:
MW0802
RF122:
SAB0786
ST398:
SAPIG0903
T0131:
SAT0131_00949
TCH60:
HMPREF0772_12327
TW20:
SATW20_09200
USA300_TCH1516:
USA300HOU_0878
VC40:
SAVC_03775
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIIAIIILIFISFFFSGSETALTAANKAKFKTEADKGDKKAKGIVKLLEKPSEFITTILI
N315 MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILI
NCTC8325 MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILI
Newman MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILI
USA300_FPR3757 MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILI
***************************:********************************
COL GNNVANILLPTLVTIMALRWGISVGIASAVLTVVIILISEVIPKSVAATFPDKITRLVYP
N315 GNNVANILLPTLVTIMALRWGISVGIASAVLTVVIILISEVIPKSVAATFPDKITRLVYP
NCTC8325 GNNVANILLPTLVTIMALRWGISVGIASAVLTVVIILISEVIPKSVAATFPDKITRLVYP
Newman GNNVANILLPTLVTIMALRWGISVGIASAVLTVVIILISEVIPKSVAATFPDKITRLVYP
USA300_FPR3757 GNNVANILLPTLVTIMALRWGISVGIASAVLTVVIILISEVIPKSVAATFPDKITRLVYP
************************************************************
COL IINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKEEFKTMLAIAGHEGALNEIET
N315 IINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKEEFKTMLAIAGHEGALNEIET
NCTC8325 IINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKEEFKTMLAIAGHEGALNEIET
Newman IINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKEEFKTMLAIAGHEGALNEIET
USA300_FPR3757 IINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKEEFKTMLAIAGHEGALNEIET
************************************************************
COL SRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYETVMNKPYTRYPVYEGDIDNII
N315 SRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYETVMNKPYTRYPVYEGDIDNII
NCTC8325 SRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYETVMNKPYTRYPVYEGDIDNII
Newman SRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYETVMNKPYTRYPVYEGDIDNII
USA300_FPR3757 SRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYETVMNKPYTRYPVYEGDIDNII
************************************************************
COL GVFHSKYLLAWSNKKENQITNYSAKPLFVNEHNKAEWVLRKMTISRKHLAIVLDEFGGTE
N315 GVFHSKYLLAWSNKKEDQITNYSAKPLFVNEHNKAEWVLRKMTISRKHLAIVLDEFGGTE
NCTC8325 GVFHSKYLLAWSNKKENQITNYSAKPLFVNEHNKAEWVLRKMTISRKHLAIVLDEFGGTE
Newman GVFHSKYLLAWSNKKENQITNYSAKPLFVNEHNKAEWVLRKMTISRKHLAIVLDEFGGTE
USA300_FPR3757 GVFHSKYLLAWSNKKENQITNYSAKPLFVNEHNKAEWVLRKMTISRKHLAIVLDEFGGTE
****************:*******************************************
COL AIVSHEDLIEELLGMEIEDEMDKKEKEKLSQQQIQFQQRKNRNVSI
N315 AIVSHEDLIEELLGMEIEDEMDKKEKEKLSQQQIQFQQRKNRNVSI
NCTC8325 AIVSHEDLIEELLGMEIEDEMDKKEKEKLSQQQIQFQQRKNRNVSI
Newman AIVSHEDLIEELLGMEIEDEMDKKEKEKLSQQQIQFQQRKNRNVSI
USA300_FPR3757 AIVSHEDLIEELLGMEIEDEMDKKEKEKLSQQQIQFQQRKNRNVSI
**********************************************