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Summary[edit source | edit]

  • pan ID?: SAUPAN003067000
  • symbol?: argH
  • description?: argininosuccinate lyase

      descriptions from strain specific annotations:

    • argininosuccinate lyase
    • putative argininosuccinate lyase
  • strand?: -
  • coordinates?: 3453736..3455115
  • synteny block?: BlockID0021750
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0963 (argH)
    N315:
    SA0821 (argH)
    NCTC8325:
    Newman:
    NWMN_0831 (argH)
    USA300_FPR3757:
    04-02981:
    SA2981_0915 (argH)
    08BA02176:
    C248_0961 (argH)
    11819-97:
    MS7_0915 (argH)
    71193:
    ST398NM01_0943
    ECT-R 2:
    ECTR2_816 (argH)
    ED133:
    SAOV_0906c
    ED98:
    SAAV_0921 (argH)
    HO 5096 0412:
    SAEMRSA15_07900 (argH)
    JH1:
    SaurJH1_0979
    JH9:
    SaurJH9_0960
    JKD6008:
    SAA6008_00913 (argH)
    JKD6159:
    SAA6159_00819 (argH)
    LGA251:
    SARLGA251_08780 (argH)
    M013:
    M013TW_0879
    MRSA252:
    SAR0922 (argH)
    MSHR1132:
    SAMSHR1132_08120
    MSSA476:
    SAS0830
    Mu3:
    SAHV_0955 (argH)
    Mu50:
    SAV0960 (argH)
    MW2:
    MW0842 (argH)
    RF122:
    SAB0828c (argH)
    ST398:
    SAPIG0943 (argH)
    T0131:
    SAT0131_00993
    TCH60:
    HMPREF0772_12286 (argH)
    TW20:
    SATW20_09600 (argH)
    USA300_TCH1516:
    USA300HOU_0919 (argH)
    VC40:
    SAVC_03975

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHATMLANQGIISQQDSEQI
    N315            MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHATMLANQGIISQQDSEQI
    NCTC8325        MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHATMLANQGIISQQDSEQI
    Newman          MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHATMLANQGIISQQDSEQI
    USA300_FPR3757  MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHATMLANQGIISQQDSEQI
                    ************************************************************

    COL             IQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGGKLHTGRSRNDQVATDMHL
    N315            IQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGGKLHTGRSRNDQVATDMHL
    NCTC8325        IQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGGKLHTGRSRNDQVATDMHL
    Newman          IQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGGKLHTGRSRNDQVATDMHL
    USA300_FPR3757  IQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGGKLHTGRSRNDQVATDMHL
                    ************************************************************

    COL             YTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPGYTHLQRAQPISFAHHIMTYFWMLQRD
    N315            YTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPGYTHLQRAQPISFAHHIMTYFWMLQRD
    NCTC8325        YTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPGYTHLQRAQPISFAHHIMTYFWMLQRD
    Newman          YTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPGYTHLQRAQPISFAHHIMTYFWMLQRD
    USA300_FPR3757  YTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPSYTHLQRAQPISFAHHIMTYFWMLQRD
                    *********************************.**************************

    COL             QQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLNFGSLYENSLDAVSDRDYIIETL
    N315            QQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLNFGSLYENSLDAVSDRDYIIETL
    NCTC8325        QQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLNFGSLYENSLDAVSDRDYIIETL
    Newman          QQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLNFGSLYENSLDAVSDRDYIIETL
    USA300_FPR3757  QQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLNFGSLYENSLDAVSDRDYIIETL
                    ************************************************************

    COL             HNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRT
    N315            HNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRT
    NCTC8325        HNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRT
    Newman          HNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRT
    USA300_FPR3757  HNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRT
                    ************************************************************

    COL             TGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQT
    N315            TGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQT
    NCTC8325        TGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQT
    Newman          TGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQT
    USA300_FPR3757  TGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQT
                    ************************************************************

    COL             VKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDA
    N315            VKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDA
    NCTC8325        VKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDA
    Newman          VKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDA
    USA300_FPR3757  VKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDA
                    ************************************************************

    COL             DIYDYLQPENCLKRRQSYGSTGQSSVKQQLDVAKQLLSQ
    N315            DIYDYLQPENCLKRRQSYGSTGQSSVKQQLDVAKQLLSQ
    NCTC8325        DIYDYLQPENCLKRRQSYGSTGQSSVKQQLDVAKQLLSQ
    Newman          DIYDYLQPENCLKRRQSYGSTGQSSVKQQLDVAKQLLSQ
    USA300_FPR3757  DIYDYLQPENCLKRRQSYGSTGQSSVKQQLDVAKQLLSQ
                    ***************************************