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Summary[edit source | edit]

  • pan ID?: SAUPAN003287000
  • symbol?: purD
  • description?: phosphoribosylamine--glycine ligase

      descriptions from strain specific annotations:

    • phosphoribosylamine--glycine ligase
    • phosphoribosylamine--glycine ligase (GARS) (Glycinamideribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)
    • phosphoribosylamine--glycine ligase PurD
    • putative phosphoribosylamine--glycine ligase
  • strand?: +
  • coordinates?: 3662459..3663697
  • synteny block?: BlockID0023710
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1083 (purD)
    N315:
    SA0926 (purD)
    NCTC8325:
    Newman:
    NWMN_0942 (purD)
    USA300_FPR3757:
    04-02981:
    SA2981_1030 (purD)
    08BA02176:
    C248_1099 (purD)
    11819-97:
    MS7_1032 (purD)
    71193:
    ST398NM01_1072
    ECT-R 2:
    ECTR2_930 (purD)
    ED133:
    SAOV_1019
    ED98:
    SAAV_1039 (purD)
    HO 5096 0412:
    SAEMRSA15_09050 (purD)
    JH1:
    SaurJH1_1156
    JH9:
    SaurJH9_1134
    JKD6008:
    SAA6008_01030 (purD)
    JKD6159:
    SAA6159_00930 (purD)
    LGA251:
    SARLGA251_09880 (purD)
    M013:
    M013TW_1006
    MRSA252:
    SAR1048 (purD)
    MSHR1132:
    SAMSHR1132_09220
    MSSA476:
    SAS1010
    Mu3:
    SAHV_1066 (purD)
    Mu50:
    SAV1074 (purD)
    MW2:
    MW0957 (purD)
    RF122:
    SAB0941 (purD)
    ST398:
    SAPIG1072 (purD)
    T0131:
    SAT0131_01110
    TCH60:
    HMPREF0772_12159 (purD)
    TW20:
    SATW20_10700 (purD)
    USA300_TCH1516:
    USA300HOU_1018 (purD)
    VC40:
    SAVC_04535

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISEPDHQAILDFAK
    N315            ------------------------------------MTPIAEVHTEISESNHQGILDFAK
    NCTC8325        MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISESDHQAILDFAK
    Newman          MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISEPDHQAILDFAK
    USA300_FPR3757  MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISESDHQAILDFAK
                                                        *************.:**.******

    COL             RQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTAD
    N315            QQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMKKYNIPTAD
    NCTC8325        RQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTAD
    Newman          RQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTAD
    USA300_FPR3757  RQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTAD
                    :**************************************************:********

    COL             YKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVV
    N315            YKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVV
    NCTC8325        YKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVV
    Newman          YKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVV
    USA300_FPR3757  YKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVV
                    ************************************************************

    COL             FETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVL
    N315            FETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVL
    NCTC8325        FETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVL
    Newman          FETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVL
    USA300_FPR3757  FETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVL
                    ************************************************************

    COL             KLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMES
    N315            KLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMES
    NCTC8325        KLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMES
    Newman          KLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMES
    USA300_FPR3757  KLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMES
                    ************************************************************

    COL             DLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKK
    N315            DLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKK
    NCTC8325        DLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKK
    Newman          DLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKK
    USA300_FPR3757  DLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKK
                    ************************************************************

    COL             QGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
    N315            QGDTFVTSGGRVILAIGKGDNVQDAQRDAYEKVSQIQSDHLFYRHDIANKALQLK
    NCTC8325        QGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
    Newman          QGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
    USA300_FPR3757  QGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
                    ******************************:************************